Brassica rapa (field mustard): 103870030
Help
Entry
103870030 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103870030
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103870030
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103870030
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103870030
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103870030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
103870030
NCBI-ProteinID:
XP_009146372
UniProt:
M4EEX9
LinkDB
All DBs
Position
A05:23641507..23645570
Genome browser
AA seq
687 aa
AA seq
DB search
MGYKLQMSWMPSLLSQKRRNGPPLGLRNLGNTCYLNSVLQCLTYTPPLANFCLNHKHSSH
CDSFVDGERKRDCPFCIVEKRIARSLSVDHAIDAPNKISSCLKIFAEHFKFGRQEDAHEF
LRYVIDACHNTSLRLKKLRTKGGGGPESVNGSSSSSSTEVKEIFGGAMQSQVKCLPCGAE
SNKADEIMDISLEISNSSSVKESLQKFFQPEILDGNNKYKCESCKKLVTARKQMSVLQAP
NILVIQLKRFEGIYGGKIDKPITFGEILFLSTFMSKSSKDPQPEYKLFGIIVHSGYSPES
GHYYAYVKDSLNRWFCCNDASVTHSTLQEVLSEKAYILFFSRINQRPASAKNLVTTSNGT
TSHEVNGSETPRPKKFIGPLNNVSMQQPRAEQSFKKDNNNLASSKPHQFIRPLKDANMKP
REEQPFHKKNADSPQVEKAPLKPHAKISISVNLGAKRVSPTVNGRLSFDQDQDLAPEADK
ENIGSGSAKRVYTCSEKKFGTENGGNGVKENGSAQASSSSSNNNEVSLHPHERSNGSRNG
GDHHHKDSLYSCKSNGSQNGTDQEEIEKDGVSKPQPKALESSTNGDERCIFLRKDKSSRD
QLEAIKESLQEDVSSYLRSCGWYDEVHKSMRAKKRLLGELSGGDGEDGNDLKRRLIADVE
SSLSQIPDELKADLVNCLSRIGKKKYS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggatataagctgcagatgagctggatgccgagtctactcagtcagaagcgacgtaac
ggtccgcctctagggttacggaacctcggcaacacgtgctacctcaatagcgtcctccaa
tgcctcacctacactcctcccctcgccaatttttgcctcaatcacaaacactcctctcac
tgtgattcgtttgttgatggcgagaggaaacgagattgtcctttctgcatagttgagaaa
cggatagcgaggtctctcagcgtcgatcacgccatcgatgcgcctaacaagatctcgagc
tgtctcaagattttcgccgagcattttaagtttgggcgtcaggaggacgctcatgagttt
ttgaggtatgtgatcgatgcgtgccacaatacgtctcttcgtctgaagaagctgaggacg
aagggcggcggcggccctgagtctgttaacgggagtagtagtagtagtagtactgaggtg
aaggagattttcggcggtgctatgcagagccaggtgaagtgtttgccgtgcggcgcggag
tctaataaagcggatgagattatggatatcagtcttgagatttcgaatagtagctcggtg
aaggagtcgttgcagaagttcttccagcctgagattttggatgggaacaataagtacaaa
tgcgagagttgtaagaagttggtgacggcgaggaagcaaatgtcagtacttcaagctcct
aatatccttgtcatccaattgaaaaggtttgagggtatttatggtgggaagattgataag
cccattacatttggtgagattctgtttctctccacattcatgagtaaatcaagcaaggat
cctcaaccagaatacaagctttttgggataattgtgcattctggatattctcctgaatct
ggacactattatgcatatgttaaggattctttgaaccgatggttttgctgcaacgatgcg
tctgtcacacactccaccttgcaagaggttttgtcagagaaagcctacatactctttttc
agccgtatcaaccaaaggccggcttctgctaaaaatttggtgacaacatccaacgggact
acatctcacgaagttaatggctctgagacaccaaggcccaagaagtttattggtcccctt
aataatgtcagcatgcaacaaccacgagcggagcagtccttcaagaaggataataataac
ctggcttcttcaaagccccatcagtttattcgtccccttaaagatgctaacatgaaacca
cgagaagagcagcctttccacaagaagaacgctgattctccccaagttgaaaaggctcct
ctcaagccacatgcaaagatcagtatatctgtcaaccttggtgctaaaagggtatctcct
actgtcaatggcagactttctttcgaccaagatcaggacttagctccagaagcggacaaa
gagaatattggatctggttcggcaaagagggtatacacttgttcggagaaaaagtttggt
actgaaaatggtggtaatggagttaaagaaaacggcagtgcacaagctagtagtagtagt
agtaacaataatgaagtgagcttacatccacatgagcgtagtaacggctcacgcaatggg
ggtgatcatcatcacaaagatagcttatattcatgcaagagtaatggttcacaaaatgga
actgatcaggaggaaattgagaaggacggtgttagcaaaccccaacccaaagccttggag
tcttcaacaaatggagatgagcgctgcatttttcttaggaaagacaaatcatctcgtgat
caacttgaagcaatcaaagagagcctgcaggaagacgtgtcatcatatttgcggtcatgc
ggatggtatgatgaagtacacaaatcgatgcgcgccaagaagagattgcttggagagcta
tcagggggagatggtgaagatggtaacgacttaaagaggaggttgatagcagatgtagag
tcaagtttatctcagatcccagatgagttgaaagcagatctggtaaactgtctctcgcga
attggcaagaagaaatactcatga
DBGET
integrated database retrieval system
