Brassica rapa (field mustard): 103870260
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Entry
103870260 CDS
T03449
Name
(RefSeq) retinoblastoma-related protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103870260
Transcription factors [BR:
brp03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
103870260
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Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
ECU10_0150_M
TFIIB
Motif
Other DBs
NCBI-GeneID:
103870260
NCBI-ProteinID:
NP_001288864
UniProt:
I2CD53
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All DBs
Position
A05:24618489..24630765
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AA seq
992 aa
AA seq
DB search
MEEVQPPVTPPIDPNGKRSEAVLLELCEKVLSLEGSICDEALKLFTETKPILSANMANIG
SGTREEVERFWFAFVLYSVKMLTVRKQVDGQSVSGDNKFNLCQILRALKINIVDFFKELP
QFAVKAGPVLCELYGADWENRLQAKELQANFVHLSLLSKYYKRGYQEFFLTYDANAEKTS
ANSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSILAILIIHVPCRFRNFSIQ
DSSRFVKKGDKEVDLVASLCKIYDASEDELRKIMDQANNLIETILKKKPSSASTCKIDKL
DNINPDGLTYFEDLLDETSISTSLITLEKDYEDSVCNKGELDERVFINEEDSLLGSGSLS
AGAVNVTGVKRKIDSLSSPARTFISPLSPHKSPAAKTNTISGAIKLTATPVSTAMTTAKW
LRTVICPLLPKPSPGLEHFLKSCDRDITTDVTRRAHVILEAIFPNSSLGDRCAGGSLQPV
NLMDDIWAEQRRLEAVKLYYRVLEAMCIAEAQILHANNLNSLLTNERFHRCMLACSAELV
LATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLEERLLESMVW
EKGSSMYNSLIVARPLLALEINRLGLLAEPMPSLDAIAALINFSEGSNHAPSIQKHETCP
GQNGDMKSPKRQCTDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQSAFASPTRPN
PGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLFQHVLAQRTSLL
FNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDSHQSRRQGQG
RVGPDHVDIITFYNEIFIPAVKPLLVEIIPVKKDQAMEANNKPEGHCPGSPKVSVFPSVP
DMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPSKDLSAINNRLN
KYISFCGIAAAAPTARGRLNLTRKQDWSVIPW
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttcagccaccagtgaccccacccattgaccccaatggtaaaagaagtgaa
gcagttctcttggagttatgcgagaaagttctgtctcttgaagggagcatttgcgatgaa
gctttgaagttgtttactgaaaccaaaccgattttgtcggcaaacatggctaatattgga
agtggaacgcgggaggaagtagagaggttctggtttgcgtttgttctctactcagtgaag
atgcttactgttagaaaacaagtggacggacagtctgtgtctggtgataataagtttaat
ctatgtcagatactgagggctctaaagatcaatattgtggatttctttaaagagttacct
caatttgcggtcaaggctggccctgtgctatgtgagctttatggtgcagactgggagaac
agacttcaggcaaaggagctgcaagcgaactttgtgcatcttagccttctaagcaaatac
tacaaacgtgggtaccaggagttcttcttgacatacgatgcaaacgcagaaaagacctca
gcgaactctgctagttatttgccagatagttaccgttttgggtggttactctttctggca
ctccgaaaccatgcttttagccgatttaaagaccttgtgacatgcaccaatggcctagtt
tctatattggctattttgatcatacatgttccttgtcggtttagaaatttcagcatccaa
gactcttcacgttttgttaagaaaggtgacaaagaggtagacttggttgcatcactttgc
aagatatatgacgcctcagaagatgagttgaggaaaataatggaccaggctaataatttg
atagaaacaatattgaagaagaagccatcttcagcatccacgtgcaaaattgacaagcta
gataatattaacccagatggcttgacttactttgaggatttactggacgagacatccatc
tccactagcttgatcacactagaaaaagattacgaagattcagtctgcaataaaggcgaa
ctggatgagagggtgttcatcaatgaagaggatagcttactcggatcgggaagcttatct
gcaggagctgtaaatgttactggtgttaagaggaaaattgattctttgagctcacctgca
aggacatttataagtccactctctcctcataagtcacctgctgcgaagacaaatactatt
agcggtgccatcaagttgacagcaacaccagtaagcacagcaatgacaactgccaaatgg
ctcaggactgttatatgtccgcttctaccaaaaccttcacctgggttggagcatttcctc
aaatcctgcgatagggatataacaactgatgtcacacggagagcacatgtgatattggaa
gctatttttccaaatagctcccttggggaccgatgtgcaggcggaagtttacaacccgtt
aacctgatggatgacatatgggcagaacagcgaagattagaagctgtgaagttatactac
agagtcctcgaggcaatgtgtatagcagaagctcagattttgcatgcaaataacttaaac
tctctattgacaaatgagaggttccatagatgcatgctggcttgttcagctgaactggtt
ctggcaacccacaaatccataacgatgttgttcccggctgttctggagaggactgggatc
acagcctttgatctctgcaaggttatagagagtttcatcagacacgaggattctctgcct
agagagttgagacggcatctgaactcacttgaggaacggcttctcgagagtatggtttgg
gagaaaggctcttcaatgtacaactctctgattgttgccaggccgttgcttgcattggag
atcaaccggctcggattactagcagaaccgatgccatccctggatgcaattgcagctctt
attaacttctctgaaggatcaaatcatgcaccatctatccaaaagcatgaaacatgtcca
ggacaaaacggggatatgaaatcgcccaaaagacagtgtacagattaccgcagcattcta
gttgaacgcaattcctttacatcaccggtaaaggatcgtctgttggcctttggcaacgtt
aaatcaaagatgctgccacctccgttgcagtctgcctttgctagtccgacacggccaaac
ccaggaggcggtggagaaacttgtgctgaaactggtatcaatattttcttcactaagatt
aataaactggctgctgtcagaatcaatggaatggtggaaaggttacaactgtcgcagcaa
ataagggagagtgtatatcgtctcttccaacatgtacttgctcagcggacttctctttta
tttaatcggcatattgaccagatcattctctgttgcttttatggagtggccaagatatcc
caaatgagcctaactttcagggaaatcatatacaactataggaagcaaccacagtgtaaa
ccactagttttccgcagcgtttatgtggattcgcatcagagtcgccgtcaaggtcaaggg
agagtggggccagatcatgtagacatcatcacattctacaacgaaatatttattcctgcc
gtaaagccgttgctggtggagataattcctgtgaaaaaagatcaggctatggaggccaat
aataaacctgaaggtcattgtcctggatcgccaaaggtgtcggtgtttccaagtgttcca
gacatgtcccctaaaaaagtatctgctgtgcacaatgtgtatgtttctccccttcgggga
tcaaagatggatgctcttatttcacacagctcaaagagttactatgcttgtgttggagag
agcacacatgcttaccagagcccttcaaaagacctatctgccatcaacaaccgcttgaac
aaatatatctcattttgtggcatagcagctgcagcaccaaccgcaagaggacgcttaaat
ttgacgcggaagcaggactggtcagtgattccatggtag
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