Brassica rapa (field mustard): 103870457
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Entry
103870457 CDS
T03449
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103870457
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103870457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Cytochrom_D1
WDR54
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
103870457
NCBI-ProteinID:
XP_009146829
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Position
A05:complement(25280816..25286335)
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AA seq
532 aa
AA seq
DB search
MEVALEDNSLMDKVLPPDEQEIDVELEAKEKKYLRGEGANLETLKDKKLKTQLASREKLY
GKSAKAAAKIEKWLLPASAGYLETDGLEKTWRVKQTDIAKEVDILSSRNQYDIVLPDFGP
YKLDFTASGRHMLAGGRKGHLALVDMMSMNLIKEIQVRETVRDVAFLHNDQFFAAAQKKY
SYIYARDGTELHCLKERGPVARLRFLKNHFLLASVNKIGQLHYQDVTYGDMVASIRTGKG
RTDVMEVNPYNGVVALGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSLAFHPNGHLMATSG
KERKLKIWDLRKFEEVQTIHGFHAKTLSFSQKGLLAAGTGSFVQVLGDSSGDYSRYMSHS
MVKGYQIEKVMFRPYEDVLGIGHSMGWSSVLIPGSGEPNFDSWVANPFETTKQRREKEVH
LLLDKLPPETIMLDPSKIGAMRPSRRKERLTRGEIEAEKEVAVEAAKGVELKKKTKGRNK
PSKRTKKKKELVENAKRTFPEQENSAAGKKRRIGEDAAAELPACLKRFARKN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgctttagaggataacagtctcatggataaggtcttgcctcctgatgagcag
gagattgatgttgagctggaggctaaagagaagaagtatcttagaggagaaggtgctaat
ctagagacgttgaaagataagaaactaaagactcagcttgcttcacgagagaagttgtat
gggaagtctgctaaagctgctgctaaaatcgagaagtggctcttgccggcttcggcaggg
tacttggagactgatggtttagagaagacatggcgggtcaagcagacagatattgccaaa
gaagttgatatattgagctcaagaaaccaatatgacattgtgctcccagattttggcccg
tacaaactcgattttactgcaagtggacggcatatgctagctggtggtcgcaaaggccac
cttgctcttgtagacatgatgagtatgaacctaattaaagaaatccaggtacgggaaaca
gtacgtgatgttgcattcctgcacaatgaccaattctttgcagctgcccagaagaagtat
tcatatatttatgcgagagatggaactgagctccattgtttgaaggaacgtggtccagtg
gctagactcaggttcctaaagaaccacttcctcctcgcatcagtgaacaaaatcggtcag
ctacattaccaagatgtaacctacggagacatggtagctagtatccgaacaggcaaaggc
agaacagatgtaatggaagtgaatccttacaatggtgtcgtcgccttgggacactctggt
ggaaccgtcacaatgtggaaaccaaccagccaagcacctctagtccaaatgcagtgccac
cctggtccagtctcctctctcgctttccaccccaacggccacctcatggctacgtcaggc
aaagagcgcaaactcaagatctgggatctgcgcaagttcgaggaggttcagaccatccac
ggcttccacgccaagacgctgagtttcagccagaaaggcttgctagcagctggaaccgga
tcgttcgttcaggttctaggagattcaagcggtgactatagcagatacatgagccactcg
atggtgaaaggctaccagatcgagaaggtcatgttcagaccgtacgaggacgttctgggg
atcggtcactcgatgggatggtccagcgttctcattccagggtctggagagccgaacttc
gattcttgggtggctaacccgttcgaaacgacgaagcagagacgggagaaggaagtgcac
ttgcttcttgataagctcccgcctgagacgatcatgctggatccttcaaagatcggtgcg
atgagaccttcgaggaggaaggagaggttgactagaggagagattgaagctgagaaagag
gtggcggtagaagcggcgaagggggttgagctgaagaagaagactaaaggaaggaataaa
ccgagtaagaggactaagaagaagaaagagttagtggagaacgcgaagagaacgttcccg
gagcaagagaacagtgctgctggtaagaagagaagaatcggtgaagatgctgcggctgag
ctacccgcttgtctgaaaaggtttgcccgaaaaaactga
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