Brassica rapa (field mustard): 103870492
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Entry
103870492 CDS
T03449
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103870492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103870492
03036 Chromosome and associated proteins [BR:
brp03036
]
103870492
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103870492
Coactivators
SAGA/TFTC/STAGA complex
103870492
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103870492
STAGA complex
103870492
TFTC complex
103870492
SAGA complex
103870492
SLIK complex
103870492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
103870492
NCBI-ProteinID:
XP_009146875
UniProt:
M4ELZ6
LinkDB
All DBs
Position
A05:25464913..25469017
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AA seq
527 aa
AA seq
DB search
MEQPRQTSTASQPPETPSQPSEPAPKPAVLSQIQQPPSTNPNPSSASSITSSPAPPSPSL
NPNPNPPQYTRPVTSPATQHLPQSLSRPPPPSYSRPWQPHSSYGHFSSSASSSPLLSSSS
APASSSSSSLPVAGQQRGGMAIGVPASPIPSPSPTPSQPPASAFPGSFGQQYGGLGRGSV
GMSEASSNSSVPQGRMMQGTQGMGMMGTIGSGSQMRPSGMTQHQQRPAQSSLRPASSPSS
PSPVPQNFQGHSLMRPSAIGSPGVQSTGAANQPWLSSSAQGKPPLAPPSYRPQVTNPSMP
QRSHVPQHHPSTSPAASQPQQQQHQLQPQEQHQQLRSPHQPLPYSHQPPRVQGSVNQKAA
SLAMPNQPPVTQPGNQAKTVSAENEESDDRILGKRSIHEILQQIDPSEKLDPEVEGILAD
IAEDFVESITTFGCSLAKHRKSDTLEAKDILLHVERNWNIRPPGFSSDEIKTFRKPVTTD
IHKDRLAAVKKSMTVTEAANARFGTANARGGQAKTPANPLASTTFNH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaccccggcaaacctcgacggcgtctcagccaccggaaacaccctctcaaccg
tcggagccagctccaaaaccggcggttttatcccagattcagcaacctccttccaccaat
ccgaatccctcctccgcgtcctctatcacctcctccccagccccgccatcgccgtcgctc
aatccaaaccctaatccacctcaatacacacgtccggtgacatctccggcgacgcaacac
ctcccccagtctctgagtcggcctcctccgccgtcgtactcgagaccgtggcaaccacat
tcctcatacggtcacttctcctcctccgcgtcgtcgtctccgttgctatcttcctcttca
gctccagcctcttcgtcttcttcgtccctgcctgttgctggacagcaacgaggcggtatg
gcgatcggcgttccagcttctccgatcccgagcccttctccgactccttctcagcctccg
gcgtctgcttttccggggtcttttggacagcagtacggcggattgggtcgtggaagtgtc
ggaatgtcggaagcgagctccaattcaagtgtcccgcagggtaggatgatgcaaggaact
caggggatgggaatgatggggactattggctcaggttctcaaatgcggccaagtgggatg
actcagcaccagcagaggccggctcagtcttctctaaggccagcttcctcgccgagtagt
ccgtctcctgttccccaaaactttcaagggcatagccttatgagaccttcagctattggt
tctcctggtgtccaatccactggtgcagcaaatcaaccgtggttatcatcttctgcccaa
gggaagcctcctttggcacccccttcttatagaccgcaagtaactaatccctccatgcca
caaagatcccatgttcctcagcatcatccttccacttcaccagcggcttcacagcctcag
caacaacagcatcagcttcagcctcaagagcaacatcaacaattgagatctccgcatcag
cctttaccttactcacatcaaccgccccgggtccaagggtcggtgaatcagaaagctgct
tctctagcaatgccgaaccagccccctgtgacccaaccaggaaaccaagctaaaacagtt
tcagcagagaatgaggagtctgatgatcgtattctggggaaaagaagcatccatgagata
cttcagcagattgatccgtcagagaaattggatccagaggttgaaggcatccttgctgat
attgctgaagactttgtggagtcaatcacaacttttggctgttctttagccaagcataga
aagtcagatactctagaggctaaggacatcttgctccatgttgaaagaaactggaatatc
aggcctcctggttttagcagcgacgagatcaagacgtttcgaaagccagtgaccacagat
attcacaaagatagacttgccgctgtaaagaagtctatgacggtaacggaagcagcaaac
gccaggttcggaacggctaatgcaagaggcggtcaggcaaagacgcctgctaatccattg
gcctctacaactttcaatcactga
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