Brassica rapa (field mustard): 103870528
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Entry
103870528 CDS
T03449
Name
(RefSeq) probable DNA helicase MCM8 isoform X2
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brp03032
]
103870528
03400 DNA repair and recombination proteins [BR:
brp03400
]
103870528
Enzymes [BR:
brp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103870528
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
103870528
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103870528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
AAA_5
Mg_chelatase
AAA_3
Sigma54_activat
MCM8_N
AAA
AAA_16
cobW
AAA_29
Motif
Other DBs
NCBI-GeneID:
103870528
NCBI-ProteinID:
XP_009146910
LinkDB
All DBs
Position
A05:25589513..25594489
Genome browser
AA seq
788 aa
AA seq
DB search
MTSRRRGSIGVDSTDIAKILAVYFRDNENSCIDEEKLMLTAELIRIFSSPSGRDLVSQQV
SEDGGGSFSLPLDLQQFKKLCDIENFFINLEDNPKGVLPCMNAAVHKVLLSQWETNGFDD
VMKINIRLHNYPESSISLKNLRAAYIGKLVTVHGTVVKVSTVKPLVTQMAFDCAKCKTSI
TRDFTDGKFSPPQNCDTHGCKSKMFIPLRSSAQTIDFQKIRVQELQKPEDHEEGRVPRTV
ECELMEDLVDTCIPGDVVTVTGIIGVINNYMDIGGGKSKSKNQGFYYLFIEAVSVKNSKK
QSAFENSEDSGSGVQSADVGDLYSFSQRDLEFIVKFNEEYGSDTFRRILHSVCPSIYGHE
IVKAGITLSLFGGVRKHSMDRNKVPVRGDIHVIIVGDPGLGKSQLLQAASAISPRGIYVC
GNATTKAGLTVAVVKDSMTNDYAFEAGAMVLADGGVCCIDEFDKMTNEHQALLEAMEQQC
VSVAKAGLVASLSARTSVIAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPD
ELLDKQVSEHIMSLHSGGGEALPALKKFKTASGSANIHAKEGSLLSRLRLDPKKDDDFTP
IPGQLLRKYVAYARTFVNPKMSKAAGEIIQKFYLKLRDHNTSADSTPITARQLESLVRLA
QARARVDLREDITVQDAMDVVEIMKESLYDKFVDEHGVVDFGRSGGMSQQKEARRFLSAL
DKQSELQQKDCYSVSELYSLADRIGLRVPDIDTFLENLNTAGYLLKKGPKTYQVLSSSYS
RSQSSRSR
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagacgccgtggatcgatcggcgttgattctaccgatatcgcgaagatatta
gctgtgtatttcagagacaacgagaactcgtgcatcgacgaggagaagttgatgctcacg
gcggagcttatccggatattctcttcgccgagtggtagagacttagtttcccagcaggtg
agtgaagatggtggtggttccttctctttgccgcttgatcttcaacaattcaagaagtta
tgcgatatcgagaattttttcattaatttggaggataatcccaaaggagtcctcccatgt
atgaatgctgcagttcacaaggttttactaagtcaatgggagactaatggctttgatgat
gttatgaagatcaatattcgtctgcataattatcctgaatcttcaatctctctgaaaaac
ctcagagcagcatatattggtaagcttgtaacagttcatgggaccgttgttaaagttagt
actgtgaagcctcttgtgacacagatggcttttgactgtgcaaagtgtaaaactagcata
acccgggattttactgacggaaagttttcacctccgcaaaattgtgacacccatggatgt
aagtccaagatgtttattccactccgatcctccgctcagaccattgattttcagaaaatc
agggtacaggagttgcaaaagcctgaagaccatgaagaaggaagggtaccccgaactgta
gaatgtgagctgatggaagaccttgtggacacatgtatccctggtgatgtggtgactgtt
acagggattataggtgtaattaacaattacatggatattgggggagggaaatctaagtcc
aagaatcaaggattctactatttgtttatagaggcagtttcagttaaaaactctaagaag
cagtctgcatttgagaactcagaagactccggtagtggtgtccagtctgcagatgttggt
gatttatattcattctcacagagagacttggaatttattgttaagttcaacgaagaatat
ggttctgatacattccgtcgtatacttcattctgtttgtccatctatttatggccatgaa
attgtcaaagctggaataacactgtccctgtttggaggtgtaaggaagcattcgatggat
cggaacaaagttccagtcagaggagatattcatgtcattattgttggtgaccctggattg
ggaaaaagtcagctcttgcaagcagcatcggccatctcccctcgtggcatctatgtatgt
ggtaatgcgacgactaaagcagggctcaccgttgctgtagtgaaagattctatgacaaat
gactatgcgtttgaggctggtgccatggtacttgcagatggcggggtttgctgcattgac
gagttcgataaaatgaccaacgagcatcaggctttgctagaagcaatggaacaacaatgt
gtctctgttgcaaaggctgggcttgtggccagtctatcagctcggacttctgttatagca
gcagcaaatcctgttggtggccactacaaccgtgcaaaaactgtaaacgagaacttaaag
atgagtgctgcgcttctctcgcggtttgatttggttttcatattacttgacaaacctgat
gagctactcgacaagcaagtctcagagcatattatgtcgcttcattctggaggtggagaa
gcattacctgcattaaagaagtttaagacagcatcaggatctgcaaatatacatgccaaa
gagggttctctactctcaagactgcggttagaccctaagaaagatgatgacttcactccc
attcctggccaactgcttaggaaatatgttgcttatgcaaggactttcgtcaaccctaag
atgtcaaaggcagctggagagataattcaaaaattttacttgaagctgagagaccataac
acatccgctgactcaacaccaataacagcaagacaactggaaagtttggtcaggcttgcc
caagcgagagctcgggttgacttaagggaagatataacagtccaggacgcaatggatgtg
gttgaaataatgaaagaatctttgtatgataagttcgtagatgaacatggggttgtggat
tttggtcggagtggaggaatgagtcaacaaaaggaggcgagacgcttcttaagtgctctt
gataagcaatcagagttgcagcaaaaagattgttactctgtttcggagctgtatagttta
gctgataggatcgggctacgagttccagacattgatacattcctagagaacctgaacact
gccggctacttgctcaagaagggaccaaaaacttaccaggtcctctcctcatcttattct
cggagtcagtcatccaggtcaagatga
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