Brassica rapa (field mustard): 103870533
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Entry
103870533 CDS
T03449
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103870533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103870533
Spliceosome [BR:
brp03041
]
Common components
Common spliceosomal components
SR proteins
103870533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
SLU7_N
zf-CCHC_5
DUF8363
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
103870533
NCBI-ProteinID:
XP_009146916
UniProt:
A0A397ZNK3
M4ELV7
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All DBs
Position
A05:complement(25610067..25612533)
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AA seq
295 aa
AA seq
DB search
MPRYDDRYSSNDRYGGARLYVGHLSSRTRERDLEHLFSKYGRIRDLDMKRDYAFIEFSDP
RDADDARYRLDGRDFDGSRITVEFARGTPRGSRDFSSSRGPPPPGSGRCFNCGLEGHWAR
DCSAGDWKNKCYRCGDRGHIERNCKNSPKKLRRDASYSRSPVRSRSRSPPRRRRRSPSRS
YSRDRSYSRSRSPVRKETDRSPEAARSRSPEAARSRSPEAARSRSPELMVDNSPPSKDRK
RSLTPEEGSPMREKNSPKENELSPRGNDGGGIGTNEQDRSHSPREDRSPVEDDDQ
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctacgatgatcgttacagcagcaatgaccgatacggtggtgcgcgtctctat
gttggccacctctcctctcgaacaagggaacgcgatcttgaacacctcttcagcaaatac
ggaagaattcgagatttggacatgaagcgagactatgccttcattgagttcagcgatcct
agagatgcggatgatgcgaggtacaggctggacggaagagactttgatggaagccgtatc
actgtggagtttgccagagggacacctcgtggttcccgtgacttttcctcgagcagaggc
cctcctcccccagggagtggtcgttgcttcaactgtggtctcgaaggacactgggctcgt
gattgctctgctggtgactggaagaacaaatgttatcgatgtggagataggggtcacatt
gagaggaactgcaagaacagtcctaagaagctcaggcgggacgcaagttactcaagatcg
ccggttaggtctcggtctaggtctcctcctcgtcgcagaagaagaagccccagcagaagc
tatagccgtgaccgtagctacagtcgctccagatctccggttaggaaggaaacggatcgt
agccctgaagctgcaaggagcagaagccctgaagctgctaggagcagaagccctgaagct
gctaggagcagaagccctgaactaatggtggacaactctcctccatcaaaagataggaag
cgaagtttgactcctgaagaaggcagtccaatgcgtgagaagaacagccccaaggagaat
gaattgagcccgagaggaaacgatggtggaggtattggaaccaatgagcaagaccgaagc
catagtcccagagaagaccgtagccctgtggaggatgatgaccagtga
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