Brassica rapa (field mustard): 103870578
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Entry
103870578 CDS
T03449
Name
(RefSeq) LIMR family protein At3g08930
KO
K14617
LMBR1 domain-containing protein 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
103870578
04980 Cobalamin transport and metabolism
103870578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103870578
Membrane trafficking [BR:
brp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
103870578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
CCSMST1
DUF7801
AcrZ
Motif
Other DBs
NCBI-GeneID:
103870578
NCBI-ProteinID:
XP_009146971
UniProt:
M4ELR2
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All DBs
Position
A05:complement(25784069..25787701)
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AA seq
509 aa
AA seq
DB search
MGDFNLALVIVAIVVCVIVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILML
PADVANRHACRHAIYNGACNLTLPMKELWLAVYIVDAILVFFVIPFAMFFYEGDQDKSLG
KRIKSSLLWVVSTAVVCALVLGILYGVIGKVDFNVRHLASGTTSFPTSWQFSNNQPCIGN
TARQCSAFTASVASEKTWTMRTTFPEYVVALATIVGSVLFTIFGGVGIASLPLGLITAFI
RRPKAVITRSQYIKEATELGKKARELKKAADGLRQEEKDGAKGRKWRKNVKAVEKELLQL
EEDVNLLEEAYPQGEKAETAWAFTVLGYLAKFILGIIGLIVSIAWVAHIIIYLLVDPPLS
PFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIGF
VILAGLTFLYYITFGWRRKKPSARFQLSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaacctcgctctcgtgattgtcgcgatcgtcgtctgcgtcatcgtcttc
atctccagcatctacctcctcgtcaattaccagcatccagacgacgcgaaccaggcctac
ttccccaaattcgtcgtcgtcttcggcctctccatcgccatgatctcgattctcatgtta
ccggcggacgtggcgaatcggcacgcttgtcggcacgctatctacaacggagcttgcaat
ctcacattgcccatgaaggagctatggcttgccgtttacatcgtggacgctatcctcgtc
ttctttgtcatccccttcgcaatgtttttctatgaaggcgaccaagacaagagtctggga
aagaggataaaaagttccttgctttgggtcgtaagcacggctgttgtttgtgctctggtg
cttggaatcttatacggtgttattggaaaggtggacttcaatgtcaggcacttggcttct
gggacgacctctttccctacttcatggcaattttcaaataatcaaccatgtatcggtaac
accgctcgccagtgctcagcatttacagctagcgtcgcgtctgagaaaacgtggaccatg
cgtactacttttccagaatacgttgtcgctcttgcgacaattgttgggtcagttcttttc
acgatattcggtggcgttggtattgcctccctaccattaggacttatcactgctttcatc
cggcgaccaaaggctgttatcactcgatcacaatatataaaggaagcaactgaactgggg
aaaaaggctagagaactaaagaaagctgctgatggacttcgccaggaagaaaaagatggt
gctaagggcaggaaatggaggaagaatgtgaaagcagttgaaaaggagttgctgcaattg
gaggaagatgtgaacctcttagaagaagcgtatcctcaaggagagaaggcagaaactgca
tgggctttcactgtactcggatacttggccaagtttattcttggaatcataggattgatc
gtttccattgcttgggttgcacacattatcatatatctactcgtggaccctcctctctcc
ccttttcttaacgaggttttcattaagcttgatgacgtttggggtcttctaggcactgct
gcctttgctttcttctgtttctaccttctacttgctgtcatcgctggggcaatgatgctg
ggtttgaagctcgtcttcattaccattcacccgatgaaatggggagctactctaatgaac
tctttcctcttcaatgttggcctcattcttctttgctccatcagtgtgattcagttctgc
gccactgcttttggatactacgcacaagccactgctgcacaagagatcttcggtcacaca
ttacagtcccttagaggaattaagtacctctacaagtacaacgtgtttcaaatcgggttt
gttatcctggctggactgacctttctatattacattaccttcggatggagaagaaaaaag
ccaagcgcccgtttccagctctcttcttaa
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