Brassica rapa (field mustard): 103870798
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Entry
103870798 CDS
T03449
Name
(RefSeq) syntaxin-43
KO
K08489
syntaxin 16
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103870798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103870798
Membrane trafficking [BR:
brp04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
103870798
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
Syntaxin_2
FlxA
MCPsignal
EF-G-binding_N
CAMP_factor
Motif
Other DBs
NCBI-GeneID:
103870798
NCBI-ProteinID:
XP_009147210
UniProt:
M4FE96
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All DBs
Position
A05:complement(27003786..27006262)
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AA seq
317 aa
AA seq
DB search
MATRNRTLLFRKYRNSLRSVRAPMTESKSGVGPVIEMASTSLLHPKRSYTPVSTEDPGTS
SKGAVTVGLPPDWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKEDQHQIESLT
QAVTFLLRKSEKQLQRLSKGGPSEDSSVRKNVQRSLATDLQQLSMELRKKQSTYLKRLRL
QKEDGGDLEMNLNGSSSRAEDDDFDDILFSEHQMSKIKKSEEISVEREKEIQQVVESVNE
LAQIMKDLSALVIDQGTIVDRIDYNIQNVSSTVEDGLKQLQKAERTQRSGGMVKCASVLV
ILCFIMLVLLILKEIIF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcggaaccgcacgctcttgttcagaaagtacagaaactctctgaggagcgtc
cgtgctccgatgacggaatcgaaatccggcgtaggcccggtgatcgagatggcgagcaca
tctctattgcatcccaaacgctcctacactccagtcagtaccgaagatccagggacctca
agtaaaggagcagtgacagtggggttaccaccggattgggttgatgtctccgaggagatt
tcggtgaacattcagcgcgcgaggaccaaaatggctgagcttgggaaggctcatgctaaa
gctttgatgccttcgtttggggacggtaaagaggatcagcatcagatcgagtctttgacg
caggcggttactttcttgttgaggaaatcggagaagcagcttcagaggctttctaaaggt
ggaccttctgaggattcgagtgttaggaagaacgtgcagcggtctcttgcaactgatctc
caacaactttccatggagctacgcaagaaacagtctacttatttgaaacgcttgaggcta
caaaaagaggatggaggggatttagagatgaatctaaacggaagcagctctagagcagaa
gatgatgacttcgatgatatattatttagtgagcatcagatgagcaagatcaaaaagagc
gaggaaatatctgtagagagggagaaagagattcagcaggttgttgaatccgtaaacgag
ctcgctcagataatgaaggacctttctgcgcttgtgatagaccagggtacgatagttgat
cggattgactataacatccagaacgtttctagtacagttgaagatggtctcaaacagctg
caaaaggcagaacgtacacagagaagtggaggcatggttaaatgtgcgtctgttcttgtc
atcctctgtttcatcatgcttgttctcttaatccttaaggagattatcttctga
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