Brassica rapa (field mustard): 103870875
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Entry
103870875 CDS
T03449
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 20
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Module
brp_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103870875
Enzymes [BR:
brp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
103870875
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Motif
Pfam:
Pectinesterase
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
103870875
NCBI-ProteinID:
XP_033148214
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Position
A05:27016594..27018354
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AA seq
336 aa
AA seq
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MLCILQSSPGGNGGLKVAKTVVVNPNGINGDAYKTINDAIAAAPTKAESENGYFVIYVVA
GVYEEYVTVPSNKSYVMIIGDGIDKTIITGNRNVVDGSTTFASATLAVIGRGFTAANITV
RNTAGPTKHQAVAVRNSADMSAFYKCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNA
ATVLQNCNLIPRLPLQGQFNAITAQGRSDPNQNTGISIQNCRITPSAELVSSNFSVKTYL
GRPWKEYSRTVYLQNFMDGFIDAKGWNEWMGDFALQTLYYAEFMNTGPGSETANRVNWPG
YHVINETEAVWFTVSNFIVGDYWLPSMGVPYAGGLM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgttatgtattttacagtcttctcctggaggcaatggtggtctaaaggtggccaagaca
gtggtcgttaaccctaacggaatcaatggtgatgcctataaaaccattaatgacgctata
gctgctgcgccaacgaaggcagaatccgaaaacggatactttgtgatttacgtcgtggct
ggagtttacgaagagtacgtcacggtccctagcaataaatcgtacgtgatgatcattggt
gacggcattgacaaaacaataatcaccggaaatagaaacgtggttgatggttccaccact
tttgcttctgctacactagctgttatcggaagaggcttcacggcggcgaacataaccgtg
agaaacacagccggccctaccaaacaccaagctgttgctgtccgaaacagtgctgacatg
tcagcattttacaaatgtagcttcgagggctaccaagacacgctctacgtccactcactt
agacaattttacagagaatgcgacatctacggaacggtagattttatatttggaaacgca
gcaacggttcttcagaactgcaacctcattcctagattaccacttcaaggacaattcaat
gccataacggctcaaggcaggagcgatccaaaccagaacaccgggatttcgatacaaaat
tgtagaataacaccgagtgctgaattggtttcaagtaatttctcggttaagacgtattta
ggtaggccgtggaaggagtactcaaggacggtttacttgcaaaatttcatggatgggttt
attgatgctaagggatggaatgaatggatgggtgatttcgctttacagactttgtattat
gcggagttcatgaataccggaccaggttcagaaacagctaaccgggttaattggcccggt
tatcatgtgatcaatgaaactgaagctgtttggttcactgtctcaaactttattgtcgga
gactactggttgccgagcatgggagttccctacgccggtgggttgatgtaa
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