Brassica rapa (field mustard): 103870940
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Entry
103870940 CDS
T03449
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103870940
Enzymes [BR:
brp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
103870940
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
103870940
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
103870940
NCBI-ProteinID:
XP_009147422
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Position
A01:1288586..1291616
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AA seq
580 aa
AA seq
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MKIVTYNVNGLRQRVSQFDSLLKLLDSFDADIICFQETKLRRQELTSDLTIADGYESFFS
CTRTCEKGRTGYSGVATFCRVKSASLSCEVALPVAAEEGFTGLVNSGLRGGRSDSSVVAE
GLEECEKDELLRVDQEGRCVITDHGHFVVFNVYGPRAVADDAERVEFKHRFYDVLERRWE
CLLRQGRRVFVVGDLNIAPFAMDRCEAGPDFEKNEFRKWFRSLLVERGGLFSDVFRSKHP
GRKDAFTCWSSSSGAEQFNYGSRIDHILVAGPCLHEGDYQQGHSFLACHVKECDILTEYK
RFKNENMPTRWKGGLGIKLKGSDHVPVFTSFDDLPDIPKHSTPPLASRYLPMIFGFQQTL
ASVLMKRQANEQARAIEVSCSSSSQSNAIPSCGEISTGPLRNCSLTVPSPEESCSLEKES
TGRLITTSGGSRDGNKKKVRRIQSSQQLSLKSFFTSKSASYVSSSQSSSQVESIAEPTVS
SKVDDEPTTTSSQEQDQSGSPAKQKNDAALMEWQRIQNMMQNSIPLCKGHKEACVARVVK
KPGPTFGRRFYVCSRAEGPSSNPEANCGYFKWASSKFRDK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgacttacaacgtgaatggccttaggcaacgagtttcccagttcgattct
ctcctcaaactcctcgattccttcgacgcagacatcatctgcttccaggaaacgaagctg
aggaggcaagaactaacatcagatttgacgatagccgatggttacgaatcgttcttctcg
tgcactcgcacgtgcgagaaaggtcgtactggctactccggtgtagcaacgttctgcagg
gtaaagtcagcgtctttaagctgtgaagttgctttgcctgttgctgctgaagaaggcttc
actggtcttgttaacagtggcttacgaggtgggaggagtgatagttctgttgtagctgaa
ggtcttgaggagtgtgagaaagatgagcttcttagggttgatcaagaggggcgttgtgtt
ataactgatcatggacattttgttgtttttaatgtttatggaccgcgagctgtagctgat
gatgctgagagggttgagtttaagcatcggttctatgatgttttagagagaaggtgggag
tgtcttctgcgtcagggaagaagagtatttgttgttggggatctcaacatcgctcctttt
gctatggatcgttgtgaagctggccctgacttcgagaaaaacgagttcagaaaatggttt
agatctctgttagttgaacgtggtggcttattctctgacgttttcagatctaaacatcct
ggaaggaaagatgcattcacgtgttggtcatcaagtagtggagcagaacaatttaactac
ggttccagaatcgatcatatattagttgctggaccatgcttgcatgaaggagattatcaa
caaggccatagttttttagcttgccatgtcaaggaatgtgacatattaacagagtataag
cggtttaagaatgaaaacatgccaacaaggtggaaaggtggattgggtataaaactaaag
ggatcagaccatgtacctgtcttcacaagttttgatgatttgcctgacatcccaaaacac
agcacacctcctttagcttcaagataccttcccatgatttttggtttccagcaaactctt
gcgtcagtgttaatgaaaaggcaagccaatgagcaagccagagccattgaagtatcatgt
tcatcatctagtcaaagtaacgctataccaagttgtggagagatctcaacaggaccactc
agaaactgtagtttgacggttccttcacctgaggaatcttgttctttagagaaagaatcc
actgggagattaatcacaacatctggaggctctagagatggaaacaagaagaaagtgagg
aggatccaatcttctcagcagctttctctaaagtcctttttcacttccaaatctgcttca
tatgtttcctcaagtcagagctcctcccaagtagagagcatcgcagaaccgactgtttcc
agcaaagtagacgatgaaccgactactacttcatcacaggaacaagatcaaagcgggtct
cctgctaagcagaaaaacgatgcagcattaatggagtggcaaagaatacagaacatgatg
caaaacagcatacctctatgcaaaggacacaaagaagcttgtgtagctcgggttgtaaag
aaaccaggtcccacatttggacgcagattctacgtctgctctcgagctgaggggccttcc
tctaatccagaagcaaactgtggttatttcaaatgggcttcatccaaattccgagacaag
tag
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