Brassica rapa (field mustard): 103870954
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Entry
103870954 CDS
T03449
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103870954
Spliceosome [BR:
brp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103870954
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
FlgA_N
Motif
Other DBs
NCBI-GeneID:
103870954
NCBI-ProteinID:
XP_009147401
UniProt:
M4FDH0
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All DBs
Position
A05:complement(27614301..27618426)
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AA seq
398 aa
AA seq
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MSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFAE
LNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVESHD
VSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARNALDGRSIPKYLLPDH
VASCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVETQSN
VLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIATAAIAKEALE
GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVGQNVPGVADASAPTAGW
QNGQVQTQYAGYGGSPYMYPSADHAGASPSSGHPPYYG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcacagtttcggtatacgcagacgccgtcgaaggtggtgcacctgaggaat
ctgccgtgggaatgcgtggaagaggagctcatcgacctgtgcaaacgattcggcaaaatc
gtcaataccaagaccaatgtcggagccaatcgcaaccaagccttcgtcgaattcgctgag
ttgaatcaggctatatcgatggtttcgtattatgcttcatcttcggagcctgcgcagatt
cgtgggaaaactgtttatatacagtactctaatcgccatgagattgtcaacaaccagagt
cctggagatgtccctgggaatgtcctcttggttacctttgaaggagtcgaatctcacgat
gtcagcatcgatgtcatccatctggtgttttctgcttttggattcgttcacaaaattgcc
acttttgagaaagctgctggtttccaggcactagttcaattcactgatgtggagactgct
tcagcggcaaggaatgcgctagatggaagaagtatacccaaatatctacttccagaccac
gttgcctcttgcaatttgcgaatgtcttattcagctcatactgatctaaacatcaagttt
cagtcccatcgtagcagggattacacaaatccataccttccagtgaatcataccgcaatg
gacgggtctatgcagcctgctttgggtgctgatggaaagaaggtagaaactcagagcaat
gtcctgcttgctttgattgagaatatgcagtatgctgtcaccgtggatgttcttcacacg
gtcttttcagcgtatgggactgtccagaagattgctatatttgagaagaatggttcaaca
caagccttaattcaatactctgatatagcaacggcggcaatagctaaagaagcattggaa
ggacactgcatatatgacggtggctactgtaagcttcgactatcatactctcgtcatact
gatctcaatgtaaaggcttttagcgacaaaagcagagactacacactacctgatctgagc
ctactcgtgggccaaaatgttcccggagtggctgacgcttctgcgccaacagctggttgg
cagaatgggcaggtgcaaactcaatacgcaggttatggtggaagtccatatatgtaccct
tcagctgatcacgcaggggcttcaccttcttctggtcatcctccttactatggttga
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