Brassica rapa (field mustard): 103871022
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Entry
103871022 CDS
T03449
Name
(RefSeq) coiled-coil domain-containing protein 22 isoform X1
KO
K23343
coiled-coil domain-containing protein 22
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103871022
04121 Ubiquitin system [BR:
brp04121
]
103871022
Membrane trafficking [BR:
brp04131
]
Endosome - Lysosome transport
Others
Others
103871022
Protein recycling
CCC complex
103871022
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
103871022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC22_CC
CCDC22_N
NDUF_B4
PRD3_coil
DUF7311
Motif
Other DBs
NCBI-GeneID:
103871022
NCBI-ProteinID:
XP_009147479
UniProt:
M4FAA6
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Position
A6
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AA seq
488 aa
AA seq
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MEEECGGDIVMSTLMESGVSIPGDFSSVSQFTSEALTSICAQLLNLIDPSAAAASEMIPV
VVVDSLPERYMMICTDIAHSVKNLGYMGDISYHKFLHPSQDDSFRLLTFLLERLSNKKQQ
GLKASSLPPGGDIASMPKVDDTFRDTSDETFDMHLHKVEAVLKDLTMTSEIPQPPNSHAQ
NASADGSTAAEFFSLRQSSGYEQPSSVDPSESEQPNYETVELQNQHNVLLEELESGSSEL
SSLDSELELLNLAAGMLLLDEKQPGGLYQQVAVKRCNIMDLKKQWDDIRLTLEAKKLCLL
DQLHVEEEPEAKDKFHKLKTTELDLQSLSSEIQKREEERCKLQTELERQPKAAPRKSYIH
GIKEITKNSRKLDSDIQRISGETRELQLESNSIRERLHRSYAVVDEMVTRELKKDPSIRQ
VYKLVTSIHGIFEQISEKILMTDRLRREAVDYEKKLGSITSRGMSLEKLQADLDAIRQEN
QSLEKQLN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaatgtggaggagatatagtgatgtcgacgttgatggaatctggggtttcg
atccctggagatttctcctctgtgtctcagtttacatcggaggctctgacgtcgatctgc
gctcagctgcttaatctgatcgacccatcggcggcggcggcgagtgagatgataccagta
gtagtagtagattctcttccggaaaggtatatgatgatatgcaccgatatagcccactcc
gtgaagaaccttggctacatgggcgacattagttatcataagtttcttcatccctctcaa
gatgactcctttaggttgcttactttcttacttgagaggctttccaataaaaagcagcaa
ggtctcaaagcttcttctcttcctcctggtggtgatatagctagcatgccaaaggtggac
gacactttcagagatacttcagatgagacttttgatatgcatttacacaaggttgaagct
gtcctgaaagatcttaccatgactagcgaaatccctcagccacccaactctcatgctcaa
aatgcttcagcagatggttctaccgctgctgaattcttctcactgagacagtcatctgga
tatgaacaaccttcttctgtagacccgtctgagtcagagcagccaaattatgagactgtt
gagttacagaaccaacataatgtgctcttggaggaacttgaatctggatcttcagagcta
agcagtcttgacagtgagttggagttgttgaatttggctgcggggatgttgttattggat
gaaaaacagcctggtgggttatatcaacaagtagcggtcaaaaggtgcaatatcatggat
ctgaaaaaacaatgggacgatataaggctgactttggaagctaaaaagctatgtcttttg
gaccaacttcatgtggaggaggagccagaggctaaagacaagttccataagttgaaaacg
actgaacttgatttacagtctctctcatcagaaattcaaaagagggaagaggaacgatgt
aaactacaaactgaacttgagaggcagccaaaagcagcgccacggaagtcttatatccat
gggattaaagaaataacgaaaaacagccgcaaactggatagtgacattcagaggatttca
ggggagactagggagctacaattagagagtaactccatccgagaacgtttgcaccgatca
tatgctgttgtggatgagatggttacaagggaactgaaaaaggatccatccatacgacag
gtctacaagctagtgaccagtatccacggtatttttgagcaaatctctgaaaagatcctc
atgactgatcggttaagaagagaagcagttgactatgagaagaagctgggttccatcaca
agccggggcatgagtctggaaaaattacaagccgacctcgatgccatcaggcaagagaac
caaagtcttgagaaacaactgaattaa
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