Brassica rapa (field mustard): 103871259
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Entry
103871259 CDS
T03449
Name
(RefSeq) syntaxin-81
KO
K08492
syntaxin 18
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04130
SNARE interactions in vesicular transport
brp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103871259
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103871259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103871259
Membrane trafficking [BR:
brp04131
]
SNARE
Syntaxin (Qa)
Stx-rER
103871259
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
103871259
NCBI-ProteinID:
XP_009147733
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All DBs
Position
A06:complement(1466016..1468223)
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AA seq
310 aa
AA seq
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MSRFRDRTEDFKDSVRKSAISDGYTEAKVASTMASFIIHKPKERSPFTRAALKTLESIKE
LDQFMMKHRKDYVDMHRTTEHEKDSIEQEITAFIKACKEQIDVLKNSIRNEEANSKGWLG
LAADNFNADTIAHKHGVVLILSEKLHSVTAQFDQLRATRFQDIINRAMPRRKPKRITKEA
SPVNATLANPEPVEPDEIQAQPRRLQQQQLLDDETQALQVELSNLLDGARQTETKMVEMS
ALNHLMATHVLQQAQQIEVLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLT
FSVLFLDWYS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagattcagagacagaacagaggatttcaaggactctgttcgcaaatccgctatc
tctgatggctacaccgaggctaaagtggcatcgacgatggcgtcttttatcatacataag
ccaaaggagaggtctcctttcaccagggctgctctcaaaacgctggaaagcatcaaggag
ttggatcagtttatgatgaagcatcgtaaggactatgttgatatgcaccgcactactgaa
catgaaaaggatagcattgaacaagaaattactgcttttattaaagcttgcaaagaacag
attgatgttctcaaaaacagcattagaaatgaagaagcaaactccaaaggatggcttggt
ctcgcagctgataacttcaatgctgatactattgcacacaaacatggagtggttttgatt
ttgagcgagaagcttcattcagtcaccgcacagtttgaccagcttagagctactcgtttc
caagatattattaaccgagctatgcctagaagaaaacctaagaggatcacgaaggaagct
agtccagttaatgcaactctggcaaatccggagcccgtagagcccgatgaaattcaggcc
cagcctcgtagattacaacaacaacagcttctagacgatgaaacacaagcccttcaagta
gagctgagtaatcttttagatggtgctaggcagacggagactaagatggtggagatgtct
gcattgaaccacttgatggcaactcatgttctgcaacaagcccaacagattgaagtttta
tatgaccaggctgttgaggcaacgaagaacgtggagcttggaaacaaagagctttcacaa
gcaatccaacgtaacagcagcagcagaacctttctcttgctgtttttcttcgtccttact
ttctctgtcttgttcttggattggtacagttaa
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