Brassica rapa (field mustard): 103871282
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Entry
103871282 CDS
T03449
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
brp03015
mRNA surveillance pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103871282
09122 Translation
03013 Nucleocytoplasmic transport
103871282
03015 mRNA surveillance pathway
103871282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103871282
03041 Spliceosome [BR:
brp03041
]
103871282
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103871282
Spliceosome [BR:
brp03041
]
Complex C
Other components
EJC/TREX
103871282
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
103871282
NCBI-ProteinID:
XP_009147763
UniProt:
M4DQW9
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All DBs
Position
A6
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AA seq
199 aa
AA seq
DB search
MANLEPETVDFEPEEDDLMDEDGAAADLSPRAANPRLRSTIAGANDDSAQRKTKGRGFRE
EKDSDRQRRLSSRDFDSLGSDGGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIK
SLHLNLDRRTGFVKGYALIEYEKSEEAQNAIKAMNGAELLTQNVSVDWAFSNGPNAGSYR
RRNMRSGRSQRSRSPRRRF
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctagaacccgaaacagtcgatttcgagccagaggaggatgacctcatggac
gaagacggtgcagcagctgatctctccccacgcgctgccaaccctcgccttaggtctacc
atcgccggagcgaacgacgattcagctcagaggaagaccaaaggccgtggctttcgcgag
gagaaagattccgatcgccagcgccgcctttcctcccgagatttcgattcgctcggttcc
gatggtggtcccggccctcagcgatctatcgaggggtggattattttggtgacgggagtt
catgaggaggcacaggaagatgatatatcgaatgcttttggtgattttggggagattaag
agtttacatctcaatctcgatcgtcgtactggttttgtcaagggttatgctttgatagaa
tatgagaagagtgaagaagcacagaatgctatcaaggcaatgaatggtgctgagcttctt
acacagaacgtcagcgttgactgggccttcagcaatggacccaatgcgggatcttacagg
agaagaaacatgaggtctgggaggtcacaacgttcaagaagcccgagaagacgtttctga
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