Brassica rapa (field mustard): 103871321
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Entry
103871321 CDS
T03449
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103871321
Membrane trafficking [BR:
brp04131
]
Protein recycling
Others
Retriever complex
103871321
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps35
Pex2_Pex12
DUF445
Motif
Other DBs
NCBI-GeneID:
103871321
NCBI-ProteinID:
XP_009147807
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Position
A06:complement(1781404..1787982)
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AA seq
912 aa
AA seq
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MEFEFRRRDYGADHESHLLPRSRTQKHPLSSPTASRQHQMKTVRDKDPPDFFDPLRGLDV
NASAEDKVEEEDTSLSTEAVTQELTKEWKSLKRILIQRFPVSKVISFSPVSNVITKGSKV
ETPSAQPHLEETGSEQASLEGTAKVMDQQEYLAKVRELIDGITKAWQVEDRVTSLKLSIK
VTKLLMDTTVLQFYPTVFVVVTDMLDMVGDMVWERIKEKAEYDVDGTVICTLPNDFQAND
ICLEARETCYNWFCKVGSVRELLPRIYLELAILPCWRFLINQPREVLDRLVMMVRGLADP
LASLYCRLYMVHRMQKLGFCNSGYLIKCVKDIEDVLAPILVDKDGCSYITDDKKLLFNLM
EPAIEYIMKCLLLTGRQENNVLGILEELGFGRNKSQPSDNSSHVSILLHHLLKALPSEIV
SSQAMEILHMIKCSNDCSFSQVLNYRLLGNRLCEGRSQEGFLSSLVNEIMQAASQYQMLY
DYLRIMDAYVDLLLQNKMFQRYQENHLDALLDDIVTLARDKFLSEEEQASLQSIILKLLS
HFEDLQKVLSLNHFIEFLDLMSGTSKKSVNMHLLSMGTRNGCICDSTTVQLLFEVSQGLY
DATDFVNIKDDDNRQTSHLISRFVEMVDYGAERERHLLFLAECRDAFSGVHELKETLVRS
SNTMAVKALKAEKKHINFVKSCLAFSEVTIPSVTIPTKQLNLYLETAEVALLGGLISHSD
GLLMSVIECLEDVTPPDGLKSIDADSMASVVCKLCSLLVMVPGNPEKGVIEILKSIFSAT
CSSSRAMPRVKVKILCAIISLLSTLAQDNLPYRSANPEIIGNDLLFFGDSSYKNELVSWT
QLVVGELVDAIEQESSQIARGNIALEACNCISSALVMNEKVSQLCLRLLETAKGCLGATD
RYLEATKQSLQL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagttccggcgtcgcgactatggagctgaccatgaatctcatctccttcct
cgctcaagaactcaaaagcaccctctttcctctccaactgcttctcgtcaacaccaaatg
aaaactgtcagagataaggatcctcctgacttctttgatccattgaggggattggatgtg
aatgcttcagcagaagacaaggttgaagaagaagatacttctctatccactgaagcggtg
actcaggagctgacaaaggagtggaagtctcttaaacgtatcttgatccagcgcttccct
gtctccaaagtcatttctttttctccagtatctaatgtaataacgaaaggttccaaagtt
gagactccttccgctcaaccacatttggaggaaacaggcagcgaacaggcttctctggaa
ggaactgctaaagtgatggaccaacaggaatatctagccaaagtacgcgagctaatagat
ggaataactaaagcttggcaggttgaagatcgagtaacatcgttaaagttatcaataaag
gtcacaaaacttctgatggacacaacagttttacagttttatcctacagtctttgttgta
gtcactgacatgcttgatatggttggggatatggtgtgggaacggatcaaggagaaagca
gaatatgatgtagatggaacagtgatctgcaccttaccgaatgattttcaagcaaatgat
atctgccttgaagcaagagagacttgctataactggttctgcaaagttggttcagttcga
gaacttcttccccgcatttacttggagctggcaattttaccttgctggcgtttcctcatt
aatcaacccagagaagttctggatcgtttagtcatgatggtgagaggtcttgcagatcca
ctggcatctttgtattgtcgtctttatatggtgcatcgtatgcagaagttgggtttctgc
aattcaggatatctaatcaaatgcgtcaaggatattgaagatgtattggcacctatttta
gtggacaaggacgggtgttcctatattacagacgacaaaaagttgctttttaatttgatg
gaaccagccattgagtatataatgaagtgcttattgctcactggacgtcaggagaacaat
gtgttgggcatacttgaggagcttggatttggaaggaataaatctcagccgtccgacaac
tcttcacacgtgtccattttacttcatcacctactcaaggcacttccatccgaaatagtt
agttcacaagctatggagatcctgcatatgattaaatgcagcaatgattgttctttcagt
caggttttgaattacaggttacttggaaataggttgtgtgaagggagatctcaagaaggt
tttctgagttcactcgtcaatgaaattatgcaggctgcttctcagtatcagatgctgtat
gactacttgagaattatggacgcatatgtggatctgttgttgcagaacaagatgtttcaa
cggtatcaggaaaatcatttggatgcgctcttggatgatattgtaactctagctcgtgac
aagtttctttctgaagaagaacaagcaagtttgcaatccataattttgaagctgctgtct
catttcgaggacttgcaaaaagtactttctctgaatcatttcatcgagttcttggatctt
atgtctgggacgtcaaaaaaaagtgttaacatgcatctcctgagcatgggtactaggaat
ggctgcatatgtgattcaacaaccgtgcaattgctttttgaagtttctcagggtctttat
gatgctacagatttcgtcaacataaaggatgatgataatcgacagacatcacatttaatt
tctcgctttgttgagatggttgattatggggcagaaagggaacgccatttgttgtttttg
gcggagtgtcgtgacgcctttagtggtgtacatgaacttaaggagacacttgtccgttca
agcaacacaatggcagtaaaagcactaaaagcagaaaagaagcatatcaactttgtaaag
tcttgtctagcattcagcgaagttaccattccatctgttacaattccaacaaaacagtta
aatctttacctcgaaactgctgaggttgcgcttttaggtggtttgatttctcattccgat
ggactgctcatgtcagttattgagtgtttagaggatgtgacgccaccagatggtttaaag
tcaattgatgcggatagtatggcctccgtggtatgcaaattgtgtagcctcctggtaatg
gttccaggtaatcctgagaaaggcgtgatagagatcctcaagagcatattttctgctact
tgctctagttcacgggcaatgccaagagtgaaggtgaaaatactttgtgctatcatttca
ctcttgtcgacacttgcccaggataatctgccttaccgttctgccaatccagagataatt
ggaaacgatttactgttctttggtgattcatcatacaagaatgaacttgtctcttggact
cagctagttgttggtgaacttgtagacgctattgagcaagaatcgtcacagattgctcgc
gggaacattgcgcttgaagcttgcaattgcatatcatcagcactagttatgaatgagaaa
gtctcacaactttgcttgagactgctcgaaacagcaaaaggttgtttgggtgccacggac
aggtaccttgaagccactaagcaatcactccaattatga
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