Brassica rapa (field mustard): 103871628
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Entry
103871628 CDS
T03449
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH16, mitochondrial
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
brp03029
]
103871628
Enzymes [BR:
brp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103871628
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
103871628
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GFIT
Motif
Pfam:
SUV3_C
Helicase_C
Suv3_C_1
DEAD
Motif
Other DBs
NCBI-GeneID:
103871628
NCBI-ProteinID:
XP_009148149
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Position
A01:11974404..11978582
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AA seq
571 aa
AA seq
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MAYSLLRIRKVSPFGISRVLQADKASLWRFHLEPECARFLRFGVFTRNYGKILGSSNYDF
TGSGPTSSFDFTDLTCPHTWYPIARRKKRKVILHVGPTNSGKTYNALKQLERSSSGVYCG
PLRLLAWEVAKRLNKANVPCDLITGQEKDLVEGANHKSVTVEMADVTSVYDCAIIDEIQM
VGCKQRGFSFTRALLGIAANELHLCGDPAVVPLVEDILKVTGDDVEVLTYERLSPLVPLK
VPVRSVSDIKTGDCLVTFSRKDIYRHKNTIEKAGKHLCSVVYGSLPPETRTAQATRFNDA
TNDFDVLVASDAIGMGLNLNISRIIFSTLEKFDGTETRDLTVSEIKQIAGRAGRFRSQFP
VGEVTCLHKEDLPLLHSSLKSPSPIIERAGLFPTYDLLSRYSQAHPKLGLYKILEHFVEN
AKLSSNYFISNVEDMMKAAALVDELPLKLQDKYLFVVSPVDINDEISGRGFAQFAQNYSK
TRVVKLREILSDDTVKVPRTPTELKELESIHKVLDLYVWLSLRLEDSFPDREVAASQKSI
CNVLIEQFLEANRLISPIPFSSKKLRSRRKF
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattctcttcttcggattcgaaaggtttcacctttcggaatctctcgtgttctt
caagctgataaggcaagtttgtggcggtttcacttggaacctgagtgtgctcggtttctg
agatttggtgtcttcactaggaactacggaaagatcttagggtcctctaactacgacttc
actggctccggacctacctcatctttcgatttcactgatctcacctgtcctcacacatgg
tatccaattgctcggaggaagaagcgtaaagtcattctacatgttggccccacaaacagt
ggcaaaacatataatgccctcaagcaacttgagcgtagttcttcaggtgtgtattgtggt
ccgttaagattgttggcatgggaggtagctaaacgcttaaacaaagctaatgttccttgt
gatttgatcaccggacaagagaaagacttagtggaaggtgctaatcacaaatccgtcact
gttgaaatggctgatgttacctctgtctacgactgtgccatcattgacgagattcagatg
gtgggatgtaaacaaagggggttttcatttactcgtgctctacttgggattgcagctaat
gaactacatttatgtggtgatccagctgtcgttcctcttgttgaagacattctgaaagta
accggagatgatgttgaggttcttacatatgagaggctttcgccattagtccctttgaag
gttccagttcggtcagtttccgatattaaaactggggattgtcttgtaaccttttcgaga
aaagatatatataggcataagaacacaattgaaaaggcggggaagcatctttgctctgtg
gtttatggttcattgcctccagagactcgtacagcgcaggcaacaaggtttaacgacgcg
accaatgactttgatgtgcttgttgcgagcgatgcgattggcatgggtcttaatttgaat
atttcaagaattatcttctccacccttgaaaaatttgatggtaccgagaccagagaccta
acagtatctgagattaaacaaattgcagggagagctggcagattccgttcacagtttcct
gttggagaagtaacttgtttgcataaagaagatcttccgttgcttcattcgtctttgaag
tctccttcacctattattgagcgtgctggactgtttccaacgtatgacctcctatctaga
tattcgcaagcacaccctaaactcggactgtacaagattttggaacatttcgttgaaaat
gcaaagttatcttctaactactttatctctaatgttgaagacatgatgaaagctgcagct
cttgttgatgaattacctctcaaattgcaagacaagtacctatttgtggtcagtccagtt
gacataaatgatgaaatatctggtcggggatttgcacagtttgctcaaaactactcgaaa
acacgcgttgtgaagctccgagagatactttcagatgacacagtgaaggttcccaggaca
ccaacagagctcaaagaacttgaatccattcacaaggttttggatctgtacgtatggtta
agcttaaggctagaggactcttttcctgacagggaagtggcagcttcacaaaagtcaatc
tgcaatgtactgattgagcagttcttagaggcaaatagattgatctctcccatccccttc
tcaagcaaaaaactgaggagccggcgtaaattctaa
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