KEGG   Brassica rapa (field mustard): 103871749
Entry
103871749         CDS       T03449                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103871749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:brp03041]
    103871749
   03400 DNA repair and recombination proteins [BR:brp03400]
    103871749
Spliceosome [BR:brp03041]
 Complex B
  Other components
   Prp19 complex
    103871749
 Complex C
   Prp19-CDC5 complex
    103871749
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    103871749
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 C45G9_C TPR_HPS5_insect
Other DBs
NCBI-GeneID: 103871749
NCBI-ProteinID: XP_009148277
UniProt: M4DU00
LinkDB
Position
A6
AA seq 844 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLLPTQWRTIAPIVGRTPSQCLERYEKLLDAACTKDENYEAADDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIGNSHRKRKRKGIDYNAEIPFEKRAPAGFYDTADEDRPADQVKFPT
TIEDLEGKRRADVEAQLRKQDVARNKIAERRDAPAAILQANKMNDPEAVRKRSKLMLPPP
QISDHELEEIAKMGYASDLLAENEELMEGSAATRALLANYSQTPRQGMTPLRTPQRTPAG
KGDAIMMEAENLARLRDSQTPLLGGDNPELHPSDFTGVTPRKKEIQTPNPMLTPSMTPGG
ASLTPRIGLTPSREGSSFAMTPRGTPFRDELHINEDMDMHENAKLERQRREEARMSLRSG
LTGLPQPRNEYQIVAQPPPEESEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQ
RDLPRPPAASLELIRNSLLSANRDKSSVVPPSPVDDADEMVRKELLQLLEHDNAKYPLDE
KAEKKKGGKNRANSSGSQVTAIEDFEENELQEADKMIKEEAQFLCAAMGNESKTFDEFVV
AHDDCVKDIMYFPTRNAYGPSSVAVKAEKVAALQVEMENARKKMEEDEKKAEHMKAKYKT
YTKGHEKRAETVWSQIEASLKQIEIGGTEVECFKALKRQEEMAASFRKKNLEEEVVKQKE
TERRLQARYGELLSTLEKAEELMVGFRAQALKQTDVVEDSLNQKEAKLATGEEEDVAISM
EASA
NT seq 2535 nt   +upstreamnt  +downstreamnt
atgaggattatgatcaagggaggtgtgtggaagaacaccgaagatgagatcctcaaagcc
gccgtcatgaagtacggtaagaaccaatgggctcggatctcctctcttctcgttcgtaag
tccgccaaacagtgtaaagctcgttggtacgagtggctcgatccttccatcaaaaagact
gaatggaccagagaagaggatgagaagcttctacatctcgcgaagcttttgcctactcag
tggagaactattgctcccattgtgggacgaacgccatctcagtgccttgagaggtatgag
aagcttcttgacgcggcttgcaccaaggacgagaattacgaagcagcggacgatccgcgg
aagctgcgtcctggcgagattgatcctaatccggagtcaaagcctgctcgtcctgatccg
gtggacatggacgaagacgaaaaggagatgctttccgaagcgagggcgaggctggccaac
actaggggaaagaaggctaagagaaaagctagagagaagcagctggaggaagcgaggagg
cttgcttctctgcagaagaggagagagttgaaagcagctgggattgggaacagccatagg
aaaaggaagcgaaaggggattgattataatgcagagattccttttgagaagagggcgcct
gcggggttttatgatactgcggatgaggaccgtcctgctgaccaggtgaagtttccgacg
accattgaggatcttgaagggaaaagaagggctgatgtggaagcgcagttgcggaagcaa
gatgttgctaggaacaagattgctgagagaagggatgctccggcggctatattgcaagcg
aacaagatgaatgatcctgaagctgttaggaagaggtcaaagctgatgttaccaccaccg
cagatttcagaccacgagctagaggagattgcaaagatggggtatgctagtgaccttctt
gcggagaatgaggagctgatggaaggcagtgctgctactcgtgcgcttttggcaaattac
tcgcagacaccaaggcaaggaatgacaccattgaggacgcctcaaagaactcctgctggt
aaaggtgatgctattatgatggaagctgagaacctggctaggttgagagactctcagaca
cctttgcttggaggagataatcctgagttgcacccttctgactttactggggttactccg
aggaagaaagagattcaaacgcctaatccaatgttgaccccatcgatgacgcctggtgga
gctagtcttactcccagaattggcttgacgccatcaagagagggttcttcttttgctatg
acacccagaggtactcccttcagggatgaacttcacataaatgaagacatggacatgcac
gaaaatgcaaaacttgagaggcagagacgagaggaagctaggatgagcttacgctctggt
ctgactgggcttcctcagccaaggaacgaataccaaatagttgcacaacctcctcctgaa
gaaagtgaagagccagaagagaaaattgaggaagacatgtcagacaggattgctagggaa
aaggctgaggaggaagcaagacagcaagcgctgcttaggaaaaggtccaaggtgttgcag
agagatcttcctagacctccagcagcttcgttggaactgattaggaattcgctgctttca
gccaaccgagacaaaagttctgttgttcctcctagtccagttgatgatgcagatgaaatg
gtaagaaaggagcttctacagttgctggagcatgataatgcaaagtatcctcttgatgag
aaagctgagaaaaagaaaggaggcaagaaccgtgctaacagttctggttctcaagttact
gcaattgaagactttgaggaaaatgaactccaagaggctgacaaaatgataaaggaggag
gcacaatttctttgcgcggcaatgggaaacgagagcaagacatttgacgagttcgtagta
gctcacgacgattgtgtgaaggatatcatgtacttccccactcgaaatgcttacgggccc
tcaagtgttgctgtgaaggcagagaaagttgcagctttgcaagtggagatggagaatgcg
aggaaaaagatggaggaggatgagaagaaggcagaacacatgaaagccaagtataaaact
tatacaaagggccatgagaaaagagcagagaccgtgtggagccagatagaggcgagtttg
aagcagattgagattggtggaacagaagtagaatgctttaaagcattgaagaggcaagaa
gagatggctgcatctttcagaaagaagaatttggaggaagaagtggtaaagcaaaaggag
acggagcggagactgcaagcacgttatggggagctgttgtcaacgcttgaaaaagcagag
gagttgatggtcgggttccgagcacaagcattgaaacagacggatgtcgtcgaggattct
cttaatcagaaagaagctaaactagccactggagaggaagaggacgtagccatatccatg
gaagcttctgcgtaa

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