Brassica rapa (field mustard): 103871768
Help
Entry
103871768 CDS
T03449
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103871768
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103871768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
103871768
NCBI-ProteinID:
XP_009148302
UniProt:
M4DTY5
LinkDB
All DBs
Position
A06:complement(3821627..3825287)
Genome browser
AA seq
633 aa
AA seq
DB search
MSSVKLQLQDKGNHVVMDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEESNRGYWDLV
WSGPGTAGTFDVIKGTKFEVIMETEEQIEISFTRKWDPSQEGKAVPLNIDKRFVMLRGSS
GFYTYAIYEHLKEWPAFSIAETRIAFKLRKDKFHYMAITDDRQRFMPLPDDRLPDRGQAL
AYPEAVLLVNPVEPQFKGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTG
GPQKQNLTSHVGPTALAVFMSAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDP
LWLWQDAKSQMNVEVESWPYSFPASDDYVKAEQRGNVVGRLLVQDRYVDKDFIAANRGYV
GLALPGAAGSWQRECKDYQFWTRTDEEGFFYINGVRPGQYNLYAWIPGFIGDYKYDDIIT
ITPGCYMYMEDLVYQPPRNGATLWEIGFPDRSAAEFYAPDPNPKYINKLYQNHPDRFRQY
GLWERYAELYPDKDLVYVVGSSDYSKDWFYAQVTRKKDSKTYQGTTWQIKFELKNIDKDH
TYTLRVAIASATFAELQVRVNDANASPLFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSK
LVEGENTLFLTQPRSISPFQGIMYDYIRFEAPS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgttaaactgcagttgcaagataagggcaatcatgtggtgatggataatggc
attgctcgtgttacattatcaaagcctgatggaattgttacaggtatcgagtataatggc
atcgataacttgctcgaggttcttaatgaagaatccaacagagggtattgggacctcgtt
tggagtggaccaggaaccgctggtacatttgatgttataaaaggaacaaagtttgaggta
ataatggaaaccgaagaacagattgagatctctttcacaagaaaatgggacccatcacaa
gaaggcaaagctgtccctttgaacattgacaaaagatttgttatgcttcgtgggtcgtca
ggattctacacttatgccatctacgagcacttgaaagagtggcctgctttctcaatagct
gaaactagaattgcattcaagctaagaaaggataagtttcactatatggcaataactgat
gataggcagaggttcatgccattgcctgatgaccggttaccggatagaggccaagctctg
gcttaccctgaagctgttctacttgttaaccctgttgagcctcagtttaaaggagaggtt
gatgataagtaccaatattcatgcgaaaacaaagacattactgtccatggatggatatgc
acggagcaaccatcagttggtttctggctcataactcctagccatgagtaccgaactggt
ggacctcaaaaacagaacttgacatctcacgttggacccactgctcttgctgtgtttatg
agtgcacactatacaggggaggatttagtgccaaagttcagtgaaggagaggcatggaag
aaggtgtttggaccggtctttgtctatttaaactcctctactgatgatgataatgaccct
ctttggctctggcaagatgctaaatctcagatgaatgtggaagtagaaagctggccttac
agttttccagcttctgatgattatgtgaaagcagagcaacgtggtaatgttgttggcaga
cttctcgttcaagacaggtacgtagataaagatttcattgcagcaaatagaggttatgtt
ggtttggctctgcctggagctgctggttcatggcaacgagaatgcaaggactatcaattc
tggacaagaacagatgaagaaggattcttttacataaatggagtacgaccaggccaatac
aatctctatgcatggattcctggttttattggcgactataaatacgatgacatcatcacc
atcactccaggttgttacatgtatatggaagatcttgtatatcagcctccaagaaatgga
gcaaccttgtgggaaattggttttccagatcgatcagccgcagagttttatgctcctgat
ccgaatccaaaatatatcaacaaactttatcaaaatcaccctgacaggttcagacaatat
ggattatgggaaagatacgcagaactatacccagataaagacttggtatatgttgttggc
tctagcgactatagtaaagactggttttatgctcaagtcactagaaaaaaggatagcaaa
acatatcaaggaacaacatggcaaatcaaattcgaactcaaaaacattgataaggatcac
acatatactttacgagtagccatcgcatccgctacttttgccgaactccaagtacgtgta
aatgatgcgaatgcaagcccgttgttcacgagcggattgatcgggagagacaactcgata
gcaagacatggaatacatggattgtactggttgttcaacgtggaagtggctggttcaaag
cttgtagaaggcgagaatacattgtttctcacgcagccaaggtccataagtcctttccaa
gggattatgtatgactacatccgattcgaagctcccagctaa
DBGET
integrated database retrieval system
