Brassica rapa (field mustard): 103871850
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Entry
103871850 CDS
T03449
Name
(RefSeq) ABC transporter B family member 10 isoform X2
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103871850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brp02000
]
103871850
04147 Exosome [BR:
brp04147
]
103871850
04090 CD molecules [BR:
brp04090
]
103871850
Enzymes [BR:
brp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103871850
Transporters [BR:
brp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103871850
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103871850
CD molecules [BR:
brp04090
]
Proteins
103871850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_16
AAA_29
AAA_21
AAA_22
AAA
RsgA_GTPase
DUF87
AAA_15
APS_kinase
AAA_25
AAA_30
nSTAND1
AAA_19
DUF815
DUF2714
Motif
Other DBs
NCBI-GeneID:
103871850
NCBI-ProteinID:
XP_009148411
UniProt:
M4DTR4
LinkDB
All DBs
Position
A06:complement(4195637..4205915)
Genome browser
AA seq
1225 aa
AA seq
DB search
MQPSDVSATVAEKKEKEKKRPSVSVFKLFSFADFYDCVLMTLGSIGACIHGASVPVFFIF
FGKLINIIGLAYLFPQEASHKVAKYSLDFVYLSVAILFSSWLEVACWMHTGERQAAKIRK
AYLRSMLSQDISLFDTESSTGEVISAITSDILVVQDALSEKVGNFLHCMSRFIAGFAIGF
ASVWQISLVTLSIVPLIAVAGGIYAYVSTGLLASVRKSYVKAGEIAEEVIGNVRTVQAFT
GEEKAVRSYGEALENTYTYGRKAGLAKGLGLGSMHCVLFLSWALLVWFASIIVHKGIANG
GESFTTMLNVVIAGLSLGQAAPDISTFVRARAAAYPIFQMIERNKEVKTGRKLGKVDGEI
CFRDVTFTYPSRPDVVVFDKLNLVIPAGKVVALVGGSGSGKSTVISLIERFYEPTDGAVF
LDGNDVRYLDLKWLRGHIGLVNQEPAFFATTIRENIMYGKDDATDEEITRAVTLSEAVSF
INKLPDGFETQVGERGVQLSGGQKQTITISRAILKNPSILLLDEATSALDAESEKTVQKA
LDKVMVGRTTVVVAHRLSTVRNADIIAVVHGGNIIESGSHDELISNPDGAYSSLLRIQEA
ANPNVNHTPSLPVSTEPLPERPITKTDLCSMDQSGNQPDTTRQGKVTLGRLYSMIRPDWK
YGLFGLFGSLVAGSQMPLFALGISQALVSYYMDWETTQKEVKRISILFCCASVITVISHA
IEHTTFGIMGERLTLRVRQMMFSAILRNEIGWFDKVDNTSSMLASQLESDSTLLRTIVVD
RSTILLENFGLVVTSFIISFILNWRLTLVVLARYPLIISGHISEKIFMQGYGVNLNKAYL
KANMLAGEAISNIRTVAAFCAEVKVLELYSNELREPSERSFRRGQMAGILYGVSQFFIFS
SYGLALWYGSVLMGQGLSSFESVMKTFMVLIVTALVMGEVLALAPDILKGNKMVASVFEL
LDRRSQVVGDKGEELSNVEGTIELKGVHFSYPSRPDVTIFGDFDLTVPYGKSMALVGQSG
SGKSSVLSLILRFYDPTAGIIMIDGQDIRKLKLKSLRRHVGLVQQEPALFATTIYENILY
GKEGALESEVMEAAKLANAHDFICSLPGGYSTQVGERGIQMSGGQRQRIAIARAVLKNPA
ILLLDEATSALDVESERVVQQALDRLMRNRTTVVVAHRLSTIKNSDMISVIQEGKIIEQG
SHNSLIENENGPYSRLINLQQHQLS
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgtccgacgtttcggcaactgtggccgagaagaaagagaaggagaagaagcgg
ccaagtgtatcagtgttcaagcttttttcctttgctgatttctacgattgcgttctgatg
actcttggatccattggtgcgtgcattcacggtgcctccgttccagttttcttcattttc
ttcggcaaacttatcaacatcatcggtcttgcttacctcttcccccaagaagcttctcac
aaagtagccaagtactcgctggattttgtatatctgagtgtggcaatactcttctcatca
tggttagaggttgcatgttggatgcatacgggagaaagacaagctgcaaaaataagaaaa
gcatatcttcggtctatgttaagtcaagacataagcttattcgacaccgaatcttccacc
ggagaagtcatctccgccatcacttccgacatacttgtcgtccaagacgctctatccgaa
aaggtaggaaactttctgcactgcatgagccggtttatagctggttttgcaatcggattc
gcgagcgtatggcaaataagtctcgtcactctctccatagtcccactcattgcggtcgcc
ggtggcatctacgcttatgtcagcaccggactcctcgccagtgtccgaaaatcatacgtc
aaagccggcgagattgcggaagaggtgattgggaatgtgaggaccgtacaagcattcacg
ggagaagaaaaggcggtgagatcatacggggaagctctggagaatacgtacacgtacggg
agaaaagccggtttagctaaaggactaggactcggttcgatgcactgtgttctgtttttg
tcgtgggctttgcttgtttggttcgcaagcatcattgttcacaaggggattgctaatggc
ggcgagtctttcaccaccatgctcaacgttgtcatcgctggcttgtctcttggccaggca
gcgccagacatctccacatttgtacgagcgagagctgctgcttatcctatctttcagatg
attgaacggaacaaggaggtgaaaacaggtcgtaaactcgggaaagtagacggagagatt
tgtttcagggacgtgactttcacctacccgtcacgtcccgacgtggtggtctttgacaag
ctaaacctagtgatccctgctgggaaagtcgttgcccttgttggaggaagcgggtcaggt
aaaagcacggtgatatctctgatcgagaggttctacgagcctaccgatggggcggtgttt
cttgacgggaacgatgttagataccttgatcttaagtggcttagaggacacattggtctg
gttaatcaagagcctgctttttttgcaactaccattcgtgagaacattatgtatggtaaa
gatgacgcgactgatgaggaaatcacccgtgcagtgacgctctcggaagcagtttcattc
atcaataagctaccagatggttttgaaacacaggttggcgagaggggggttcagctatca
ggtgggcagaagcagacgatcacgatctcgagagccatcttgaagaacccatcaatactc
ttactggacgaagcaacaagcgcgctagacgcagagtcagagaaaaccgtgcaaaaagct
ttggacaaagtgatggtcgggagaacaacggttgtggtggctcatagactctccaccgtg
agaaacgctgacatcatagccgttgttcacggaggaaacatcattgaatccggaagccac
gatgaactcatctctaacccggacggagcttactcttctctcttacgtatccaagaagct
gcaaaccctaacgtaaaccacactccaagcttaccagtcagtacagaacccttgccggaa
cgaccaataacaaagacggacttgtgttccatggatcaatcaggaaaccaaccagacaca
actagacaaggcaaagtaacattgggacgtctctactctatgatacgtcctgactggaag
tatggactctttgggttgtttggttctttagtggccggttctcaaatgccgcttttcgca
cttgggatctcgcaggcgttagtttcttattacatggactgggagacgactcaaaaagag
gtcaagaggatctctatcctcttctgttgtgcctcggtcattaccgtcatctcacacgcc
atcgagcataccacctttggtatcatgggtgagcgtttgactctccgcgtccgccaaatg
atgttttcagcgatcctgaggaatgaaattggatggtttgataaagtggataacactagc
tcaatgttagcgtcgcagcttgaaagcgacagcactttgcttagaacgatcgtggtcgat
aggtcgacgattctgttggagaattttggactagttgtgacatctttcatcatttctttt
atactcaactggcgtctcactcttgttgtcttggcaagatatccattgatcatcagcgga
catattagtgagaaaattttcatgcaaggctatggagtaaacttgaataaagcgtattta
aaggctaacatgttggccggagaggctattagcaacattcgaaccgtagctgccttttgt
gccgaggttaaggttctagaactttattccaacgagcttcgagaaccttccgaacgttct
tttaggcgtggacagatggctggcattttgtacggcgtctctcagttcttcatcttctcc
tcctacggcctcgccctctggtacggatcggttttgatggggcaaggattatcaagtttc
gagtctgtgatgaaaacattcatggttttgatagttactgcgttagtgatgggtgaagtg
ttggctctagcccctgatatacttaagggaaacaagatggttgcttcggttttcgagcta
ttggaccgaagaagtcaggtcgttggagataaaggcgaggagctgagtaatgtggaaggt
actattgagctcaaaggtgtccatttcagctacccttcacggcctgatgtgactatcttc
ggcgatttcgacctgacagttccttatgggaaaagcatggcgctcgtgggacaaagtggg
tctgggaagagttcggtcctttcgctcattcttcggttctatgatcctacagccggaata
atcatgattgacggacaagacatcaggaaactgaaactgaaatcgctccgaagacacgtc
ggtctggttcaacaagaaccggctctttttgcgacaactatctacgagaacatcttgtat
ggaaaagaaggagcactggagtctgaagtcatggaagcagctaagcttgcaaacgctcac
gacttcatctgctctctcccgggaggctactcaactcaagttggggaacgtggcattcaa
atgtcaggcggccagagacaaaggatagccatcgctagagccgtcctcaagaatccagct
attctgctactcgacgaagccacaagcgccttggacgttgaatcagagcgtgtggtacaa
caagcattggataggctaatgaggaacaggaccacggtggtagtggctcacaggctatcg
acgatcaagaactcagatatgataagtgtgatacaagaaggtaagatcatagagcaaggc
agccacaatagcctcattgagaatgagaatggtccttactctagacttatcaatctccag
cagcatcaactatcctga
DBGET
integrated database retrieval system
