Brassica rapa (field mustard): 103871859
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Entry
103871859 CDS
T03449
Name
(RefSeq) 15-cis-zeta-carotene isomerase, chloroplastic
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00906
Carotenoid biosynthesis
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Module
brp_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
103871859
Enzymes [BR:
brp01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
103871859
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Motif
Pfam:
NnrU
PEMT
ICMT
EhaG
Motif
Other DBs
NCBI-GeneID:
103871859
NCBI-ProteinID:
XP_009148420
UniProt:
M4DTQ6
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Position
A06:complement(4234534..4236336)
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AA seq
356 aa
AA seq
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MAVYHLLLSTSPSLALPPRRPNFNSILRTPAHPRLAKFPTSSPPAIRKTLVRSTLREDPD
ADNPSLLIGEDSAAFELGKQKLVSWVYFGVILGVVLYILNVVWIDNSTGFGKSYIDAVST
LSGSPEVAMLMLILIFATVHSGLASLRDVGEKLIGERAFRVLFAGVSLPLAMSTIVFFIN
HRYDGSQLWQLQGVPGVHEAIWVANFVSFFFLYPSTFNLLEVAAVDKPKMHLWETGIMRI
TRHPQMVGQIVWCLAHTLWIGNSVAASASLGLIAHHLFGAWNGDRRLAKRYGDAFEGIKK
RTSIVPFAAIIEGRQVLPEDYYKEFVRLPYLAITALTVGAYFAHPLMQGASFRLHW
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttatcatctcctcctctcgacctctccttcgcttgctcttcctcctcgccgt
cctaacttcaactcaatcctacgtacaccagctcaccctcgtctcgcaaagttccccact
tcctctccaccggcaattcggaaaactctcgtccgtagcactctccgggaagacccagac
gcagacaatccatctctgctgatcggagaagactctgctgctttcgaattaggcaaacag
aagcttgtttcctgggtttacttcggcgttatccttggagtcgtcctctacatcctcaac
gtcgtttggatcgataactccaccggtttcggaaaatcatacatcgacgccgtctccacc
ctctccggctcaccggaggtggcgatgttaatgcttatactaatcttcgcaactgtgcac
agtgggttagctagtctgagagatgtaggagagaaactcataggcgaaagagcatttcgt
gttctctttgctggtgtctctcttcctttagctatgagcaccattgttttctttataaac
catagatacgatgggtcacagttatggcagcttcagggtgttccgggagttcatgaagct
atttgggtcgctaactttgtctccttcttctttctttatccttcaactttcaatcttttg
gaggtggctgctgttgataagcccaagatgcatctgtgggagactggcatcatgagaatc
actcgtcatcctcagatggttggacagatcgtttggtgtttggcacacactctctggatt
ggaaactcagtggctgcatcagcttctcttggtttgattgcacaccatttgtttggagcg
tggaatggggacaggagattagctaaaaggtatggagacgcttttgaaggcatcaagaag
agaacgagtatagttccgtttgccgccattattgaaggacgccaagttttgcctgaggat
tactacaaagagtttgttaggttgccttatcttgcaatcacggcgttaacagttggagcc
tattttgctcacccgctaatgcaaggtgcaagcttcaggcttcattggtag
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