Brassica rapa (field mustard): 103871886
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Entry
103871886 CDS
T03449
Name
(RefSeq) syntaxin-125
KO
K08486
syntaxin 1B/2/3
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103871886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103871886
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103871886
Membrane trafficking [BR:
brp04131
]
SNARE
Syntaxin (Qa)
Stx-PM
103871886
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
103871886
Exosomal proteins of other body fluids (saliva and urine)
103871886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
DUF7201
COG6_N
Treslin_STD
Erp_C
STX6_10_61_N
CD225
HTH_25
LMBR1
DUF6261
CCDC-167
PNMA
Spectrin_SYNE1
DUF1664
Motif
Other DBs
NCBI-GeneID:
103871886
NCBI-ProteinID:
XP_009148453
UniProt:
A0A397YZU7
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All DBs
Position
A06:4353768..4355655
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AA seq
298 aa
AA seq
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MNDLFSNSFKRNQAQMSDVEAGQETMNLDKFFEDVENVKDDMKGVETLYKKLQDSNEECQ
TVHNAKKVKELRAKMDADVGQVLKRVKIIKQKLEALEKANANSRNVPGCGPGSSTDRTRS
SVVSGLGKKLKDLMDSFQSLRARMNDEYKETVERRYFTITGEKADEQTIDNLIASGESEN
FLQKAIQEQGRGEIMDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIE
SHVAKASSFVRRGTDQLQDAREYQKSSRKWTCYAIILFIVVFILLLIPVMPHIMLMLK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttattctcaaattcgttcaagcggaaccaggctcaaatgagcgatgtggaa
gcaggtcaagaaacgatgaacctcgacaaattcttcgaggacgttgagaatgtgaaggat
gacatgaaaggagtggagactctttataagaagcttcaagactccaacgaagaatgccag
accgtgcacaatgccaagaaggtgaaggagctacgagctaagatggatgctgacgtgggt
caggtccttaagagggtcaaaatcattaagcagaagctcgaagccctagagaaagccaac
gctaatagccgtaatgtcccgggttgtgggcccggttcgtctactgataggactcggtct
tctgtggttagcggtctcgggaagaagttgaaggacttgatggatagtttccagagtcta
cgtgcgcgaatgaacgatgagtataaggaaaccgtagagcgcaggtatttcacaataaca
ggagaaaaagcggacgagcaaacaattgataacttgattgcaagcggtgagagtgaaaat
tttctccaaaaagcgattcaagagcaaggaagaggtgagatcatggacacgatatctgag
atccaggaaagacatgatgcagtgaaggagatagagaagaatctacttgagctgcaccaa
gttttcttggacatggcggctttagtagaagcacaagggcaacagctgaacaatatagag
agccatgtggcaaaggctagctcgtttgtgagaagagggaccgatcagctccaagacgcg
agggaataccaaaagagctcgaggaaatggacttgttatgccatcattctcttcatcgtt
gtctttatccttcttcttattcccgttatgccccatattatgctcatgctgaaatga
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