Brassica rapa (field mustard): 103871898
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Entry
103871898 CDS
T03449
Name
(RefSeq) partner of Y14 and mago
KO
K14294
partner of Y14 and mago
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103871898
03015 mRNA surveillance pathway
103871898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103871898
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103871898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
TonB_N
Motif
Other DBs
NCBI-GeneID:
103871898
NCBI-ProteinID:
XP_009148470
UniProt:
A0A397YVA3
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Position
A06:4402830..4404964
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AA seq
227 aa
AA seq
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MGSSNRIGEQKKQMAELSKNLKEGERILEPTRRPDGTLRKPIRIRAGYVPQDEVVVYQSK
GSLMKKELASLGPPGYEPDPTPKPKTKAAKKNERKKEKRLQAALQKGTSSEDGSASSNVD
KEEAVPVVTPSNGSQSVNVLVSGLEALDVSSNKDVASLTSELGEAPNPGTAREDTEKRIR
TLKKKIRLTEAQQQKTAPKDLKPEQLEKFSKLEEWRQELKALEDKEA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcagcaacagaatcggggaacagaaaaagcaaatggctgaactgagcaaaaac
cttaaagaaggtgagaggattctggagcctacacgtagacctgatggtactctccgcaaa
cccatccggattcgagctggatatgttcctcaagatgaagttgtcgtttatcagtccaaa
ggttctttgatgaagaaggagctggcctcactaggacctccaggttatgaaccggatcca
actcctaaaccaaagaccaaagctgctaagaagaacgaacgtaaaaaagagaagagatta
caggctgctttgcaaaaaggtaccagctctgaggatggatcagctagtagtaatgtagac
aaagaagaagctgttcctgttgtgactccaagcaatggttcccaatctgttaatgtattg
gtttctggtttggaggctttagacgtttcttcaaataaggatgtagcgtctcttacttcg
gaacttggagaagcacccaatccaggaactgcaagagaagacactgagaaaagaatacgt
acacttaagaagaaaatccgactcacagaagctcaacagcagaagactgctcccaaagac
ctaaagccggagcaattggagaagttctctaagttggaggaatggaggcaagaactcaag
gctttggaggataaggaggcttag
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