Brassica rapa (field mustard): 103871998 Help Entry 103871998         CDS       T03449                                  Name (RefSeq) vacuolar sorting protein 18   KO K20181   vacuolar protein sorting-associated protein 18 Organism brp  Brassica rapa (field mustard) Pathway brp04148   Efferocytosis Brite KEGG Orthology (KO) [BR:brp00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     103871998  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:brp04131]     103871998 Membrane trafficking [BR:brp04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     103871998    Hops complex     103871998 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin zf_RING_Vps8 zf-RING_11 Nup54_57_C zf-RING_Vps41 zf-C3HC4 zf-RING_UBOX zf-rbx1 zf_RING_Vps8_fungal Motif Other DBs NCBI-GeneID:  103871998 NCBI-ProteinID:  XP_009148586 LinkDB All DBs Position A06:complement(4999925..5006849) Genome browser AA seq 988 aa AA seqDB search MDQGRQVFSVDLLERYASKNRGMITCMAAGNDVIVLGTSKGWIIRHDFGVGSSYDIDLSV GRTGEQSIHKVFVDPGGSHCIATVTGVGGAETFYTHAKWPKPRVLSRLKGLLVNSVAWNR QQITEVSTKEIILGTQDGQLFEMAVDEKDKREKYIKFLFELEELPEAFMALQMETANINS GMRYYVMAVTPTRLYSFTGIGTLESVFASYKERAVHFMELPGEIPNSELHFFIKQRRAVH FAWLSGTGIYHGGLNFGAQHSYPNGDENFVESKALLDYSKLSDGTEIVKPSSMALSEYHF LLLIGNKVKVVNRISEQIIEELQFDITADSASRGIIGLCSDASAGLFYAYDQNSIFQVSV IDEGRDMWKVYLDLKVFAAALANCRDPLQRDQVYLVQAEAAFADKEYLRAASFYAKINYV ISFEEVTLKFISINEPEALRTFLLRKLDTLSKDDKCQITMISTWATELYLDKINRLLLED DTAIENRNSEYHSVIQEFRAFMSDCKDVLDEATTMKLLESYGRVEELVYFANLKEQYEIV IHHYIQQGEAKKALEVLQKSSVSDELQYKFAPELIMLDAYETVEAWMASKNLNPRRLITA MMRYSSEPHAKNETHEVIKYLEFCVHSLHNEDPGIHNLLLSLYAKQEDDSALLRFLQCKF GKGRENGPEFFYDPKYALRLCLKEKRTRACVHIYSMMSMHEEAVALALQIDPELAMAEAD KVEDDEDLRKKLWLMVAKHVVKQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL IDDFKEAICSSLEDYNKQIEQLKEEMNDATRGADNIRNDISALTQRYAVIDREEECGVCK RKILTMTGDFRMAQGYSSSGPLAPFYVFPCGHSFHAQCLITHVTSCAHEEQAEHILDLQK QLTLLGSETRRDMNGNRSDEPITSTTTADKLRSELDDAIASECPFCGELMINEITLPFIK PEETRHSASWDLRPQTNLANQRTISLPV NT seq 2967 nt NT seq  +upstreamnt  +downstreamnt atggatcaaggaaggcaagtgttttcagttgatctcctcgagagatatgcctcgaagaat cgtggcatgatcacatgtatggcggctggaaacgatgtgattgttctgggaacaagcaaa ggatggatcatccgccatgattttggagttgggagttcttatgatattgatctctctgtt ggtcgaactggggagcaatcgattcacaaggtttttgttgaccctggtggtagccattgc attgctacggtcactggtgttggaggagctgaaactttttatactcatgctaaatggcct aagccgcgtgtgttgagccgcttgaagggtttgttggttaactcggtggcttggaacagg caacagataacagaagtttcaactaaggagatcatcctgggcactcaagatgggcagcta tttgagatggctgtggatgagaaggataagagagagaagtacatcaagtttttgttcgaa ctagaagaacttcctgaagccttcatggctttgcagatggaaacagccaacataaacagt ggaatgaggtactatgtgatggctgtaactcccactcgactctactcgttcaccgggatt ggaacattagaatctgtttttgctagttataaagaacgtgcagttcattttatggaactt cctggtgaaataccaaacagtgaactacatttctttataaagcaacgaagagcggtgcat tttgcgtggctttcaggaacaggaatttatcatgggggcctaaatttcggtgctcagcac agttacccaaatggtgatgagaattttgtggagagcaaagccctcttggactactcaaag ctgagtgatggcactgaaatagtcaagcctagttcgatggcactctcagaatatcatttc ttgcttcttattgggaataaggttaaggttgtgaatcggattagtgaacaaatcattgaa gagctccagtttgatataacggcagattcagcttcgaggggcataattggactttgcagc gatgcatctgctggtcttttctatgcgtatgatcagaattcgatcttccaggtttctgta attgatgaaggcagagatatgtggaaggtttacctagacttgaaagtttttgctgcagct ttagcaaactgccgtgaccctctccagagagaccaagtttatttagttcaggcagaagct gcatttgccgacaaggaatatctacgagcagcatcattctatgccaaaatcaattatgta atatcttttgaagaggtcacgttgaagtttattagtatcaacgaaccggaagctttgaga accttcctgttgcggaagcttgatactctttcaaaggatgataaatgccaaattacaatg atatcaacatgggcaactgagctgtatctggacaagataaatcggctgcttttggaagat gatactgctatagaaaaccgtaactcagagtatcactcagtcattcaagaattccgtgct ttcatgagcgactgcaaggatgtattagatgaggcaacaaccatgaaacttctggagagt tatggtcgggttgaagagttggtatattttgcaaacctgaaggagcagtatgaaatcgtt attcaccattatattcagcaaggagaagcaaagaaagctttggaggtgctccagaaatct tcagtttcagatgagcttcagtataaatttgcgccagaacttattatgcttgacgcgtat gaaaccgtggaagcatggatggccagtaaaaatctgaatccaaggagactgattactgca atgatgcgttactcaagcgaacctcatgcaaagaacgagacacatgaagtcataaaatac cttgagttttgcgtccatagtttgcataacgaggatccagggattcacaatttacttctc tcattatatgccaagcaggaagatgacagtgccctcctccgtttcctgcaatgcaaattt gggaaaggacgagagaacggtcctgaatttttctacgatcccaaatatgcattgcgccta tgtctcaaggaaaagagaactcgtgcctgtgtccatatatacagtatgatgtctatgcat gaagaggcggtggcccttgctcttcagattgacccagaacttgctatggctgaggctgat aaggttgaagatgatgaagacctgagaaagaagctgtggctgatggttgcaaagcatgtc gtcaaacaggaaaagggagcgaaaagggaaaacataaggaaagctattgcctttctcaag gaaactgatggccttctaaagattgaagatattttgccattctttccggactttgccttg atagatgacttcaaggaagcgatttgctcatctctggaggattacaacaagcaaatagaa caattgaaagaggagatgaacgatgccacacgtggtgcagataatattagaaatgatatt agtgccctaactcaaagatatgctgtaatcgaccgcgaagaggaatgcggggtttgtaaa cgtaaaatcttgacgatgaccggggatttcagaatggctcagggatattcatcatctgga ccactggctcctttctatgtttttccttgtgggcactctttccatgcacagtgcctgatt acacatgtcacaagctgtgcacacgaagagcaagccgagcatatactcgatctgcagaag cagctgacattgcttggtagtgaaacccggagggatatgaatggtaatcgatctgatgaa cctataactagcacaactactgcagacaagcttcgatcagagctagatgatgctatcgcc agcgaatgcccgttctgtggagaattaatgatcaatgagatcactctgccttttattaaa cctgaggaaacacgacactctgcttcatgggacctccgaccacagaccaacttagcaaac cagaggaccatttctttgcctgtttga

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