Brassica rapa (field mustard): 103872259
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Entry
103872259 CDS
T03449
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103872259
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103872259
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103872259
Enzymes [BR:
brp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
103872259
Amino acid related enzymes [BR:
brp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103872259
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103872259
Prokaryotic type
103872259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1_2
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
103872259
NCBI-ProteinID:
XP_009148843
UniProt:
M4EBP1
LinkDB
All DBs
Position
A06:complement(5860322..5866168)
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AA seq
1107 aa
AA seq
DB search
MSLFFLRRAKPLFTSPSQASFVSPTLTNLIHRSFHGSRIMSEAEKKILTEEELERKKKKD
EKAREKELKKQKAAEKAKLAELKAKQAKDGTSAPKKSTKKSSKRDAIEENPADFVDPETP
LGERKRLSSQMAKQYSPAAVEKSWYAWWENSDFFKADAKSSKPPFVIVLPPPNVTGALHI
GHALTSAIEDLIIRWKRMSGYNALWVPGMDHAGIATQVVVEKKLMRERGLTRHDVGREDF
INEVWKWKNQHGSTILTQLRRLGASLDWSRECFTMDEQRSKAVTEGFVRLYKEGLIYRDV
RLVNWDCVLKTAVSDVEVEHIDIKEKTLLKVPGYEKPVEFGLLTSFAYPLEGGLGEVVVA
TTRVETMLGDTAIAIHPDDARYKHLHGKFVVHPFNGRRLPIICDGILVDPNFGTGCVKIT
PAHDPNDCEVGKRHNLEFINIFTDDGMINTNGGSDFTGMPRFAAREAVVEALKNKGLYRG
AQNNEMRLGLCQRTGDVIEPMIKPQWYVNCSMIAKEALDVAITDENKKLEFIPKQYTAEW
RRWLENIRDWCISRQLWWGHRIPAWYATLLEDERKEVGAYSDHWVVARTEEEARKEAAEK
FSGKKFELTQDHDVLDTWFSSGLFPLSVLGWPDETEDFKAFYPTSVLETGHDILFFWVAR
MVMMGMKLGGDVPFSKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLDGLHKRLEEG
NLDPKELVVAKEGQVKDFPNGISECGADALRFALVSYTAQSDKINLDILRVVGYRQWCNK
LWNAVRFAMMRLGDDYSPPLTLSPETMPFSCQWILSVLNKAISKTVDSLNAFEFSDAANT
VYAWWQYQFCDVYIEAIKPYFAGDNPAFASERAHAQHALWVSLETGLRLLHPLMPFVTEE
LWQRLPSPKNSERKASIMICDYPSAIENWTNEKVETEMETVLASVKCLRALRAELLEKQK
NERLPAFALCENNVTSEIVKSHELEIRTLANLSSLEVLLKGEHAAPAGSAVETVNENLKV
YLKVDRAINTEAEQEKIRNKIDELQKQKEKLQKMMSVSGYEEKVPANIKEDNATKLAKIL
QEFDFFEKESARLVAETENSGNEQQKK
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcttcttcctcagaagagccaagccgttatttacatctccttctcaggccagc
ttcgtatctccgacgcttacgaatctaatccatcgttcgtttcacggttcgagaataatg
tccgaagctgagaagaagatcctcacagaggaggagcttgagagaaagaagaagaaggat
gagaaggctagagaaaaggagttgaagaagcaaaaggctgcggagaaagcaaagcttgca
gaactcaaggcaaagcaggcgaaagatggaaccagtgcccctaaaaagagcacaaagaag
agttccaaacgggatgcaatcgaagagaatcctgcggattttgttgaccctgaaactcct
cttggtgagaggaaaagactctcttcacagatggctaaacagtacagtcctgctgccgtt
gagaaatcatggtatgcttggtgggagaattctgacttctttaaggcggatgctaagagt
tctaagccaccgtttgttattgttcttcctcctccaaatgtgactggggccttgcatatt
ggccatgccctcacatctgccattgaggatttgattattcgttggaagagaatgtctggt
tataatgctctgtgggtgcccgggatggaccatgctggtattgctacacaggttgtggtt
gagaaaaagctcatgcgtgaaagaggattgactaggcatgacgttggccgtgaagacttc
ataaacgaagtttggaagtggaagaaccaacatggtagcacgattctaacacaactacgg
cgtctaggagcttctcttgattggtctcgtgagtgttttacaatggacgagcaaagatca
aaagctgttactgagggctttgtacggttatacaaggaagggcttatctatagggatgtt
cgacttgttaattgggattgtgttttgaaaacagccgtatctgacgttgaggttgagcat
atcgatatcaaagaaaaaacgctgttaaaagttcctggctatgagaagccagtagaattt
ggtctgctaacttcatttgcttaccctctggagggaggcttgggcgaggttgtcgttgcc
actactagggtggaaacaatgcttggggatactgccattgctattcatcctgatgatgca
agatacaagcatcttcatggaaaattcgttgtgcacccatttaatggacggaggttgcca
attatttgtgatggtatacttgttgatccaaactttggtactggttgtgttaagatcact
ccagcccatgaccccaatgattgtgaggtcggaaagcgtcacaatcttgaatttataaac
atatttacggatgatggaatgatcaacacaaacggcggttctgacttcacagggatgcca
cgctttgcagcgcgtgaggcagttgttgaagctctgaagaataaggggctgtacagaggt
gcccaaaacaatgaaatgaggcttggactttgccagagaacgggtgatgtcattgagcct
atgattaagcctcaatggtacgtcaactgcagcatgattgcaaaggaggctctcgatgtt
gccatcactgatgaaaacaagaagctcgagtttataccaaagcagtacacggcggagtgg
agaagatggctagagaacatacgtgactggtgtatttcaagacagctttggtggggccac
cggattccagcatggtacgcaacactattggaagatgagcgcaaggaggtcggtgcgtac
agtgaccattgggttgttgcaagaaccgaggaagaagctcgaaaagaggctgctgaaaag
ttttctgggaagaagtttgaactcacccaagatcatgatgtgcttgatacgtggttctct
tctgggctctttccgttatctgttctgggatggcctgatgaaactgaggacttcaaagcc
ttctatccgacatctgtcctagaaactgggcatgatattctctttttttgggttgctcgt
atggttatgatgggaatgaaactaggtggtgacgttccattcagtaaggtttatttgcac
cctatgatacgtgatgcacatgggcgtaagatgtcaaaatctcttggaaatgtcattgat
ccgcttgaagtaataaacggggtaactctcgatggtcttcataagagattagaggagggt
aacttggatccgaaagagctggttgttgccaaagaaggacaagtgaaggactttccaaat
ggtatttccgaatgtggtgcggacgctcttcggtttgcactcgtctcttacactgctcag
tctgacaaaataaacctggacatcctccgagtggttggttaccgtcaatggtgcaacaag
ctttggaacgctgtcagatttgcgatgatgaggcttggcgatgattattcacctcccctg
actctaagccctgaaacgatgccattcagctgccagtggattctctctgtactgaacaaa
gcaatatcaaagacagtggattcactaaatgcatttgagttctcggatgctgccaacaca
gtatatgcatggtggcaatatcagttctgtgatgtgtacattgaagccatcaagccttac
tttgcgggtgacaaccctgcgtttgcttcggagagggctcatgcacagcatgctctctgg
gtatcgttggagactggtttgagactgcttcaccctctgatgccttttgttacggaagag
ctatggcaacgtctgccttcacccaaaaactctgaaagaaaggcgtctatcatgatatgt
gactacccctctgctatagagaattggacaaatgaaaaagtggagactgaaatggaaacc
gttctagcgagcgtgaagtgcctgagagcactccgtgcagagttgctagagaaacagaaa
aatgaaaggttacctgcctttgctctctgtgaaaacaacgtaacttctgaaattgtaaaa
tctcacgagttggagattagaacacttgcaaatctatcgtcgttagaggttctgttaaag
ggagaacacgcagccccagctggatctgcagttgagacagtgaacgagaaccttaaggtg
tatctcaaagtggacagagccattaacacagaagcagagcaagaaaagatcagaaacaag
attgacgaactacaaaaacaaaaggagaagttgcagaagatgatgagtgtgtccgggtac
gaggagaaggtccccgcaaacattaaagaagacaacgccacaaagctcgctaagattctc
caagaattcgatttctttgagaaagagagtgctcgtctcgttgcagagacagaaaactcg
ggaaatgaacagcagaagaagtga
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