Brassica rapa (field mustard): 103872315
Help
Entry
103872315 CDS
T03449
Name
(RefSeq) uncharacterized protein LOC103872315 isoform X1
KO
K17925
sorting nexin-13
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
brp04990
]
103872315
Domain-containing proteins not elsewhere classified [BR:
brp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
103872315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
103872315
NCBI-ProteinID:
XP_009148909
UniProt:
A0A8D9D4G3
LinkDB
All DBs
Position
A06:6110322..6115489
Genome browser
AA seq
1019 aa
AA seq
DB search
MSTQKQAATVRDLVEEAKKRIVILVVCVVGLSYLLSLTSSSVLVNLPAAACLIILLRYFS
LDVEMKRKSAAYNNSKPSLSLNKPPELLKAAPRSDWRSKVNSQVVEDAIDSFTRHLISEW
VLDLWYSRITADKQGPEELVFVINGVLGELSRRFRNVNLIDLLTRDLIDIICRRVEIFRE
CQGKIERKQRRSLSFEDRDSELRRVMAADDKLHPALFSPESEHKVLQHIVERLITLTFRP
EDLHCAFFHYTVRELLACCVMRPVLNLVNPRFINERIEAAVISRIKTTDGSSAAKETSQS
EDLSEVSHDPFARYLDPSVTGVELVQLKNEQQKGKKATDKQHVTDLAKDPLLSMDTRSSR
SWNSLPLPSKVVDDIKDLQEHREGEGWGDVLDKMSQRKTETLSPEHLESVWAKGRNYEKK
EGENVVERVPPRWSSKESCNDADDARPKNLSEGTANARGTSQHNVVNRESYLSDYSSAEE
DEGQTKSSHSYTSEDEETVTGLNSPGTRVWDGRTNRNPVVSRIHHPLENSGRRFGKHSKG
DEYYEQAPRHQSSRKRSRRSGHIGNDDSDDSENDSLARSCSGTSATSSASYISVAGSDLP
NALKSSLLVDSFDKLRCEVLGANIVKSSSKMFAVYSVAVTDESNHSWSIKRRFRHFEELH
RRLKVFPEYNLHLPPKHFLSTGVDIPVIQERCLLLDDYLKKLLQLPRISGSIEVRDFLSV
DSQTYAFSSSFSIIETLTVKHVRKTSAVSTNLANVTPGPLLSRENLSSENGKSGQHIKNN
VMVDDLKSKVKAPGNDHTKTSDSDVRNNKENGGLKKGIQHADAVAFTGLPTEWVPPKLTL
PLLDLVDVVFQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKIRILRRGTVVASGIQ
RVEQILWPDGIFITKHPKRQQQSSSSDEEQQQEAERRAKFVRELMIEKAPATIVSLVGQK
EYEQCAEDLYFFLQSSVCLKLLAYDLVELLLTSAFPEMEQSFKQLQEEKHLFGQYTPPT
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacagaagcaggcggcgacagttcgggacctggtagaggaagccaagaagcgg
atcgtaatcctcgtggtatgcgtcgtcggactctcctacctcctctccctgacaagctca
tctgttttggtgaacctccctgctgctgcgtgtttaatcatcctccttcgctacttctca
ctcgatgtcgaaatgaaaagaaagtctgcagcttacaataatagcaaaccttctttatct
ctgaacaaacctcctgaactccttaaagccgctccacgctctgactggagaagcaaagtg
aactctcaggtcgttgaggatgctatagatagcttcactcgtcacctcatttctgaatgg
gtgcttgatctctggtactctcggataacagcggataagcaaggtcctgaggaactggtt
tttgttattaacggtgttctcggtgagctttcacggcggtttagaaacgtaaatctcatt
gatctgttgacgagggatctgattgatattatatgtcgtcgtgtggagattttccgtgaa
tgtcaaggaaagattgagaggaaacaaaggagaagtctcagttttgaagaccgtgactca
gaactaagacgtgtgatggccgctgatgataaattgcaccctgcattgttctctcctgaa
tccgagcataaggttcttcagcatatagtggaaagactcataacgctaacgtttaggcca
gaagatctacactgtgcttttttccattataccgtgagggagcttcttgcttgctgtgtg
atgcgaccagtcctaaatttagtcaatcctcggtttataaatgagaggattgaagctgct
gtgatatcaaggataaagactactgacggttctagtgctgccaaagagacttctcaatct
gaagatctctcggaagtttctcatgatccttttgctagatatctggacccctctgtcaca
ggtgttgagcttgtgcaattgaaaaatgaacagcagaaagggaaaaaggctacagataaa
cagcatgtaacagatttggccaaagatccattgctttcaatggacactcggtcttcccga
tcttggaactccttacccttaccttccaaagtggttgatgatattaaagatcttcaagaa
catcgagaaggagagggatggggtgatgtattagacaagatgtcacaaaggaaaactgag
accctttctcccgagcatcttgaaagcgtgtgggcaaagggaagaaattatgaaaagaag
gaaggtgagaatgttgttgagcgggtgccgcccagatggtctagcaaggaatcgtgcaac
gatgctgatgatgcacggcctaaaaacttgagtgaaggcactgcaaacgcaagaggaacc
agtcagcataatgtagtaaatagagaaagttacttatcagattattcctctgctgaagag
gacgagggccaaacaaagagtagtcattcttatacatctgaggatgaggaaacggtaaca
ggtctaaacagtcctgggactcgagtctgggatggtcgaacgaacagaaatcctgttgtc
tcacggatacaccatccacttgaaaattctggtcgtcgtttcggtaaacacagtaaaggg
gatgaatattacgagcaagcacccagacatcaatctagccggaagagatccagacgttct
ggacacattggcaatgatgatagcgatgattctgaaaatgattctttggctagatcatgc
agtggaacatctgcaacctcgtctgcatcatacatttcagtggcgggaagtgaccttccc
aatgcccttaaaagttctttgttggttgattcctttgacaaattgagatgtgaggttttg
ggtgccaatattgtgaagagtagttctaagatgtttgctgtgtattcagtcgctgtcaca
gatgaaagtaatcatagctggtctatcaaaagaagatttcgacattttgaggagcttcac
cggcggcttaaagtgtttcccgagtacaatcttcatttaccgccaaagcatttcctatca
acaggagtggacatacctgttatccaagagcgatgcctactccttgatgactatctcaag
aagctactgcagctacccagaatttcaggatcaattgaagttcgggacttcctcagtgtg
gattcccagacttatgcgttctcaagctccttctcgatcattgagacgctgacggttaaa
catgtccgtaagacctctgcagtatctacaaatttggctaacgtgacgccgggtcctctt
ctttcgagagaaaatctgagttcagagaatgggaaatcgggtcaacatattaagaataac
gttatggtggatgatctgaagtcaaaagtgaaagctcctggaaatgatcataccaagacg
tctgattcagatgtgagaaataacaaagagaacggcgggctaaaaaagggtattcaacat
gctgatgcagtggcctttaccggcctgcccacagagtgggttcctccaaagctaacatta
ccccttctagacttggtagatgttgtctttcaactccaggagggtgggtggatcaggagg
aaagctttttgggttgccaaacagatacttcaactggggatgggcgatgcattagacgat
tgggtactagagaaaatccgtattttgcggcggggaactgtagttgcttctggaattcaa
cgggttgaacagatactatggccggatgggatattcatcacaaaacatccaaaaaggcag
caacaatccagcagttctgacgaggaacagcaacaagaagcagagagacgggccaagttc
gttcgtgaattgatgatcgaaaaagctccagcgactattgtgagccttgtgggtcaaaag
gagtatgaacaatgtgcggaagatctctactttttccttcagtcatcagtatgtctaaaa
ctgttggcatatgaccttgtggagctgttgctaacctcggcgtttccggaaatggagcag
tctttcaaacagttgcaagaagaaaaacatctctttggtcaatacacaccaccaacctga
DBGET
integrated database retrieval system
