Brassica rapa (field mustard): 103872495
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Entry
103872495 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103872495
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103872495
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103872495
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103872495
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103872495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
zf-HIT
Motif
Other DBs
NCBI-GeneID:
103872495
NCBI-ProteinID:
XP_009149147
UniProt:
M4EB44
LinkDB
All DBs
Position
A06:complement(6852109..6856917)
Genome browser
AA seq
877 aa
AA seq
DB search
MLEPRGADIPILFLVLVVLPVVAYILLGKWSETSEKRGKANLLAQMAAEEAFRAETDVRG
VRFETMATENRALRTKTRNAPAASGSLRADFDAEQRPDSVAVATCGVPVNTEGHVCARCL
NPAKTRCSRCKSIRYCSGKCQIIHWRLAHKDECIPAETCSSSSERVSFENDSVLHDNGMD
SSTMYSNSIKQTAKGKTSKSSVEFASEGISQIDIRPRINTQGRKSVGKPNPSKSSRESFS
GEAAACAGGDNNKGHTRHKSRSNIGAVETNSRRHSVDNSCMQMNGQTFESGMQESYKHNL
GASSSYACPNGIRAATLPKSACTEKSKKGKVAAVSKTLRSKDTGVAEENNGNSSSMGSNL
MKMMGLRNSSKHDDRHKNLKMLFPYEEFVKFFQCEVFYLSPRGLVNCGNSCYANAVLQSL
TCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHVMMLRASGGPLSASRILSQMRSINCQI
GDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRC
DHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSI
HEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHLDTL
NASFSGHYISYVKDLRGNWFRIDDSEIHQVPMTQVMSEGAYMLFYMRSYPRPQRGEHSSK
SQVRHPQPRNEMKEQRKPVNRFKPRADYNKNLVESSSSEWSLFTSSDEAASFTTESTRDS
FSTVDYTDGCHVLDSSSPFSIFNNLHHNVEPSPHNTVACRMFSGTKPETRYFVEEEANHN
NSVVMDDISSHGYYQQSMYVDYETNCQEQTYSYEQNW
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaccaaggggagcggacataccaatattgttcctggttttggttgtacttcct
gttgtagcttacatattgttaggtaaatggagtgaaacttctgaaaaaagaggaaaggct
aacttgctggctcagatggcagctgaagaagcttttagagctgagaccgatgttaggggt
gtaagatttgagactatggctactgagaatagggctctgagaaccaagaccaggaatgct
cctgctgcgagtggttctctaagagccgactttgatgctgagcagagacctgactctgtg
gctgttgctacatgtggcgtccctgttaatactgagggacatgtatgtgcaaggtgttta
aaccctgccaagactcgctgctccagatgcaaatctattagatactgctctgggaagtgc
cagataattcactggaggttagctcataaagacgaatgcatccctgcggagacttgctct
tcttcatcagagagggtttcctttgagaatgattctgtcttgcatgacaacggcatggat
tcttctacaatgtatagtaatagtattaagcagacagcgaagggaaagacttcaaaaagc
tctgttgaatttgcaagtgaaggtatctctcagattgatattagaccacgaatcaacacg
caagggagaaaaagcgtaggaaaaccaaatccgtccaagtccagcagagaatcattcagt
ggtgaagcagctgcttgtgctggtggagataacaacaagggtcacactagacataagtca
agaagcaacatcggtgctgtggaaacaaactctagaaggcattctgttgataactcttgt
atgcaaatgaatgggcaaacttttgaaagtggtatgcaggaaagttacaaacacaatttg
ggagcgagcagctcttatgcttgtccaaacgggatcagagcagctacactgcccaaatct
gcttgcacagagaaaagtaagaagggaaaagtagctgcggtatcaaagactcttaggtct
aaggatacaggcgtggctgaagaaaacaatggcaactcctcaagcatgggttcaaacttg
atgaaaatgatgggtttaagaaattcctcaaagcatgatgatcgacataagaacctgaag
atgctttttccatacgaggagtttgttaagttctttcagtgtgaagtgttttacttatca
ccaaggggccttgtcaattgtggaaacagttgctatgcaaacgctgtgttgcagtctcta
acatgtacaaaaccacttgttgcttacttgcttcgaagatcacattcaagatcatgttct
gggaaagattggtgtcttatgtgtgaacttgagcaacatgtaatgatgcttagagcatct
ggaggtccactttctgctagcagaatcctctcacagatgcgaagtataaattgtcagatt
ggtgatgggagtcaagaagatgctcatgagttcttaaggcttttggttgcctctatgcaa
tccatatgtttagagagacttggaggcgagactaaagtggatccaaggctgcaagaaaca
actttagttcaacatatgtttggtggacgtctccgctcaaaggtgaaatgcttgaggtgt
gatcatgaatcagaaagatatgagaatataatggatctcacgctggagatttacggatgg
gtagagtctcttcaagatgcgttgactcagtttactagaccagaagatctcgatggagaa
aacatgtatagatgcagcaggtgcgctggatatgtaagagcaaggaaagaattgagcatt
catgaagcaccaaacattcttaccattgttctcaagagattccaggagggaagatacggt
aaaataaacaaatgtataagttttcctgaaatgctggacatgatacctttcatgacaaga
acaggagatgttcctccgctttacatgctttacgctgttatagttcacttggatactctc
aacgcatctttctccggtcattacatttcttatgtcaaagatttgagaggcaactggttc
agaatcgatgattccgagattcatcaagtgccaatgactcaagttatgtcagaaggagct
tatatgttgttctacatgagatcgtacccgcgtcctcaaagaggagaacacagcagcaaa
tctcaggttcggcatcctcaaccaagaaacgaaatgaaggagcagaggaaaccggtaaac
cgattcaaaccgagagcggactacaacaagaacttagtagagtcatcatcaagcgaatgg
tctctcttcacgagctcagacgaagcagcttcattcaccacagaatcaaccagagactct
ttcagcaccgtagactacacagacggctgccacgtcctggactcttcctctcctttctcc
atcttcaacaacttacaccacaacgtggagccgtccccacacaacaccgtcgcctgcaga
atgttctcgggtaccaaacccgaaacccggtatttcgtggaggaagaagcaaatcacaac
aactcggtcgtgatggacgacatatcatcccacggttattaccagcagagtatgtatgta
gattatgagactaactgtcaggaacaaacttacagttatgaacaaaactggtag
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