Brassica rapa (field mustard): 103872654
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Entry
103872654 CDS
T03449
Name
(RefSeq) probable galacturonosyltransferase 11 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00520
Amino sugar and nucleotide sugar metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
103872654
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
brp01003
]
103872654
Enzymes [BR:
brp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
103872654
Glycosyltransferases [BR:
brp01003
]
Polysaccharide
Structural polysaccharide
103872654
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Lectin_N
Motif
Other DBs
NCBI-GeneID:
103872654
NCBI-ProteinID:
XP_009149331
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Position
A06:7515029..7517923
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AA seq
529 aa
AA seq
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MRRRRVARRRLLSWIWLLLASFSVAGLVLFMVQHHHQQQDPSQLRVERDTITENVSPPRL
NFTEEVTSASSFARQLGEQMTLAKAYVFIAKEHNNLHLAWELTSKIRSCQLLLSKAAMRG
QPISLDEAKPIVTGLSTLIYKAQDAHYDIATTMMTMKSHIQSLEERASAATVQTTLFAQS
VAEALPKSLHCLMIKLTSDWLTKPSRHELAEDSPRLVDNNLYHFCIFTDNVIAASVVVNS
TVSNADHPKQLVFHIVTNRVSYKAMQAWFLSNDFKGSAIEIRSVEEFSWLNASYSPVVKQ
LLDTDSRAYYFGDQTSQETNPEPKMRNPKYLSLLNHLRFYIPEIYPQLEKIVFLDDDVVV
QKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPLISSKFDPQACGWAFGMNVFD
LVAWRKANVTARYHYWQEQNTERTLWKLGTLPPGLLAFYGLTEPLDRRWHVLGLGYDVNI
DNRLIETAAVIHYNGNMKPWLKLAIGRYKPFWLRFLNSSHPYLQDCVTA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggcggagggtagctagaaggagattgttgagttggatatggcttctccttgct
tctttctctgtcgctggtttggttctctttatggttcagcatcatcatcagcaacaagat
ccatctcagctaagagttgaaagagacacaataaccgagaacgtatctcctccccgttta
aacttcacggaagaggtaacaagtgcttcctcgttcgcgaggcagttaggagagcaaatg
acgcttgccaaggcttatgtttttatagccaaagagcacaacaacctccacttagcttgg
gagctgacttctaagatcagaagctgtcagcttctgctctcgaaagcagcgatgagaggt
caacccatttcactagacgaagcaaaacccatcgttacgggcctttcaactcttatctac
aaggcgcaagacgcgcactacgacatagccaccacaatgatgaccatgaaatctcacatc
caatcccttgaagagcgcgcaagcgcagctactgttcaaaccacattatttgcgcaatcg
gttgccgaggcgctaccaaagagcctccactgtttgatgatcaagctcacatctgattgg
ctaactaagccatcacgccatgaactggcagaggactcacctagacttgttgacaacaat
ctctaccatttctgcatcttcactgacaacgtgatagccgcctctgttgttgttaactca
accgtctctaacgctgatcatccaaaacagcttgttttccacatagtgacgaatagagtg
agctacaaagctatgcaggcttggtttctaagcaatgacttcaagggctcagcgatagag
atcaggagcgttgaagagttttcttggctgaatgcttcatactctcctgttgttaagcaa
cttctggatacagattcaagggcttactatttcggagaccagacaagtcaagaaacgaac
cctgagccaaaaatgaggaacccgaagtacttgtcattactgaaccatctcagattctac
atccccgagatctatccgcagctagaaaagatcgttttcctagatgacgatgttgtcgtt
cagaaagatttgactccactcttctccttggatcttcacggaaacgtcaatggagctgtt
gagacgtgtctcgaagccttccaccgttattacaagtatctaaacttctccaacccactc
atcagctcaaagttcgacccacaagcatgtggatgggcttttggtatgaacgttttcgac
ctggtggcttggaggaaagcgaatgtgactgctcggtaccactactggcaagagcagaac
acagaacgaacgctttggaagcttgggactctccctccgggtctgttggctttctatggt
ctcactgaaccgctagacaggagatggcatgtcttaggtttaggttacgatgtgaacatt
gataaccgtttgatcgaaacggctgctgtgattcactacaatggtaacatgaaaccttgg
ctaaagctggctataggtaggtataaaccgttctggttaaggtttttgaactcgagccat
ccttatttacaagattgtgtcacagcttaa
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