Brassica rapa (field mustard): 103872841
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Entry
103872841 CDS
T03449
Name
(RefSeq) 4-coumarate--CoA ligase-like 4 isoform X1
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00592
alpha-Linolenic acid metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Module
brp_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
103872841
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
103872841
NCBI-ProteinID:
XP_009149529
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Position
A06:complement(8688968..8697439)
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AA seq
548 aa
AA seq
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MANVERSSLVDSRSGFCKENSTFYSKRNPISLPASPSLHVTTFISCQTHSGTTAFIDAAT
GQRLSFSDLWRAVDRVAECLHRDVGLRRGDVILILSPNSFYIPIVCLAVMSLGAVVTTAN
TLSTVGEISKQIADSNPTLAFTTVQLAHKLPAGISIVLTEEEHVEPSRVVRVVGVLSEMM
KKEPSGQRVRDRVNQEDTAVMLYSSGTTGASKGVISSHRNLTSYVAKMVAKESLEDKILI
CTVPMFHTFGLLMFAMATVALGSTVVILRRFELSDMLAAVEKYRATALILAPPVLVVMTN
EGDIIKAKYDLSSLKKVTCGGAPLSKEVTEGFLKIYPAVHVLQAYALTESNGGGAYMDMV
DSRRYGTVGTLTPDVEARIVDPNTGRFMGTNQTGELWLKGPSISKGYFKNQEATSETFNL
EGWLKTGDLCYIDDDGFLYVVDRLKELIKYKGYQVAPAELEALLITHPDILDAAVIPFPD
KEAGQYPMAYVTRTLGSNLSEKQVIDFISKQVAPYKKIRKVAFINSIPKTASGKILRKDL
IKLPSSKL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgttgaaagatcatctcttgttgattcaagaagtggtttctgcaaagaaaac
tctacattctatagcaaacgcaaccccattagtctcccggcgagtccatcgctccacgtc
acaacattcatctcttgtcagacccacagtggcaccaccgccttcatagacgctgccact
ggccaacggttaagcttctccgatctctggagggccgttgaccgtgtcgcggagtgtctc
caccgcgatgtgggattacgtagaggcgacgtcatcctcatcctctccccaaactcattt
tacatccccatcgtatgcctcgccgtcatgtctctcggcgccgtcgtcaccaccgcgaac
actctcagcaccgtcggtgagatatcgaagcaaatcgccgatagcaacccgacactggcc
ttcacgacggttcagctggcacacaaactccccgccggcatctccatcgtcctcaccgag
gaggagcacgtggagccgagtcgtgtagtcagagtcgttggtgttttgtctgagatgatg
aagaaggaaccaagtgggcagcgagtcagagaccgagtcaaccaggaggatacggcggtg
atgctttactcctccggtaccacaggagcgagcaaaggtgttatctcctctcaccggaac
ttaacgtcctacgtggcgaaaatggtcgcgaaggaatcgctggaagacaagattctgatc
tgcaccgttccaatgttccacacattcggattactcatgttcgctatggccaccgtagct
ctcggttcgacggtggtgatcctccggagattcgagctcagcgacatgttggccgcggtg
gagaagtacagagccactgctctcattctggcgccgccggttttggtggttatgaccaac
gaaggagatataatcaaggcgaagtatgatctgagctccctgaaaaaagtgacgtgtggt
ggagcgccgttgagcaaggaggtaacggaggggttcttgaagatatatccggcggtgcat
gtacttcaggcgtatgcgttgacggaatcaaacggtggaggagcttatatggatatggtg
gacagccggaggtatggtacggtggggacgttgacgcctgatgttgaggcgaggatcgtg
gatccgaatacgggtcggtttatgggaactaaccaaacaggcgaactgtggctcaagggc
ccgtccatttcaaaaggttatttcaaaaaccaagaagctacaagtgaaactttcaatcta
gaaggatggctgaaaactggagatctttgctatatcgatgacgatgggtttctttatgtc
gtggatcgactgaaagaactgatcaaatacaaaggctatcaggtggctcccgctgaacta
gaagctctcctgatcactcatccagacattcttgatgccgccgttattccgtttcctgat
aaagaagcaggacaatatccaatggcctacgtgacacgaacgcttgggagcaatctctct
gagaaacaagttattgacttcatctctaaacaggtggcaccgtataagaaaataagaaag
gtcgcatttataaactccataccaaagacagcatccggcaaaatacttcgcaaagatcta
atcaagctgcccagttctaagctttga
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