Brassica rapa (field mustard): 103872847
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Entry
103872847 CDS
T03449
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
KO
K11088
small nuclear ribonucleoprotein D3
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103872847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103872847
03041 Spliceosome [BR:
brp03041
]
103872847
03032 DNA replication proteins [BR:
brp03032
]
103872847
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
103872847
Spliceosome [BR:
brp03041
]
Complex A
U1 snRNP components
Sm proteins
103872847
U2 snRNP components
103872847
Complex B
U1 snRNP components
103872847
U4/U6.U5 tri-snRNP components
103872847
Complex C
U2 snRNP components
103872847
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
103872847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
103872847
NCBI-ProteinID:
XP_009149535
UniProt:
A0A397YY19
LinkDB
All DBs
Position
A06:8730443..8731918
Genome browser
AA seq
130 aa
AA seq
DB search
MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITFTAQDGKVSQL
EHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKSGSLGVGRGRAAMRGKAPATGRGTG
GRGVAPPVRR
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaagtttgggaataccggtgaagcttctccacgaggcgtcaggtcatatagtg
acggttgagctaaagagcggcgagctctacagaggaagcatgatcgagtgtgaggataac
tggaactgccagctcgaggacattacctttaccgctcaggatggtaaggtatcacagctt
gagcatgtcttcattcgaggcagcaaagtcaggtttatggtcataccagacattctcaag
catgctccaatgttcaagcgcttagatgctagaatcaagggaaagagcggatcacttggt
gttggcagaggtagagctgcaatgcgaggaaaagctccggctactgggcgtggaactgga
ggaaggggagtagcaccacctgtgaggagatga
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