Brassica rapa (field mustard): 103873011
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Entry
103873011 CDS
T03449
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03030
DNA replication
brp03410
Base excision repair
brp03420
Nucleotide excision repair
brp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103873011
03410 Base excision repair
103873011
03420 Nucleotide excision repair
103873011
03430 Mismatch repair
103873011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brp03032
]
103873011
03036 Chromosome and associated proteins [BR:
brp03036
]
103873011
03400 DNA repair and recombination proteins [BR:
brp03400
]
103873011
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103873011
DNA Replication Termination Factors
ELG1-RFC complex
103873011
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103873011
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103873011
Check point factors
HRAD17(Rad24)-RFC complex
103873011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
RuvB_N
Mg_chelatase
AAA_11
AAA_16
AAA_5
AAA_14
ResIII
DEAD
SLFN-g3_helicase
AAA_24
nSTAND3
PhoH
AAA_28
AAA_19
AAA_assoc_2
AAA_7
AAA_30
AAA_2
RNA_helicase
Parvo_NS1
DUF815
AAA_25
NPHP3_N
IstB_IS21
TIP49
AAA_18
bpMoxR
NB-ARC
Motif
Other DBs
NCBI-GeneID:
103873011
NCBI-ProteinID:
XP_009149687
UniProt:
A0A3P5YGI0
LinkDB
All DBs
Position
A06:9488722..9491893
Genome browser
AA seq
339 aa
AA seq
DB search
MAPVLQSAQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSSNRQGGYPCPSFKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
NRILHICNEEGLNLGGEALSTLSTISQGDLRRAITYLQSGARLFGSTITSTDLLNVSGVV
PLEVVKRFFTSCKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVVEAGDDITDNQKAKI
CKCLAETDKRLVDGADEYLQLLDVASNTITALSEMAQDY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagttcttcagagcgcacagccatgggttgagaaataccggccgaagcaggtg
aaggacgtggcgcatcaggaggaggtggttcgggtcctcaccaacactctcgagactgct
aactgtccgcacatgctcttttatggaccgccaggcacagggaaaaccactacggcactt
gccatcgcccaccagctatttggacctgaattgtacaagtcaagggtgttggagctgaat
gctagtgatgacagagggatcaatgttgttcggacaaagattaaggattttgctgctgta
gctgttgggtccagtaaccgtcaaggtggttatccttgcccatcatttaagatcatcatc
ctagatgaggctgattcgatgacagaagatgctcagaacgccttgaggcgcacaatggaa
acttactccaaagtcaccagattcttcttcatatgtaattatatcagcaggatcatagag
ccccttgcttcaagatgtgccaagttcaggtttaaaccactttctgaagaagttatgagt
aaccgtatattgcatatctgtaatgaagaaggtctcaaccttggtggtgaggctctttca
actttgagcaccatatcacaaggtgatctccggagggcaatcacgtatctgcagagtggt
gcccggttgtttggatcaacaataacgtccacggatttactcaatgtgtctggggtagtc
cctctggaggtagtcaagagattttttacttcatgcaaaagtggtgatttcgatattgca
aacaaggaagtggacaacattgttgcagagggatatcctgcatctcaaatcatcaatcag
ttatttgatatagtcgttgaggctggtgatgacataacagacaatcaaaaggctaagatc
tgcaaatgtctagctgaaacagataagcgacttgtagatggtgcggatgagtacctgcag
cttctggacgtggcaagcaatacaattactgcactctcagaaatggctcaagattactaa
DBGET
integrated database retrieval system