Brassica rapa (field mustard): 103873045
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Entry
103873045 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 26
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103873045
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103873045
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103873045
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103873045
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103873045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
103873045
NCBI-ProteinID:
XP_009149726
LinkDB
All DBs
Position
A06:9703603..9709799
Genome browser
AA seq
1068 aa
AA seq
DB search
MRPNTRNKNKRPRPSDAADSYSQILRKIHEANDVTDEDVNQLFMISKPLCQGCRVNTRDN
PNCFCGLVPPPNGSRKSGLWQKTSEIIQALGPDLSSELRDSDSTPAGLTNLGATCYANSI
LQCLYMNTAFREGVFSVEVDVLRQYPVLDQIARLFAQLYASKKSFVDSDAFVKTLELDNG
IQQDIHEFSTLLLSLLERCLRHSGVSKAKTIVQDLFRGSVSHVTTCSKCGRESEASSKVE
DFYALELNIKGLKSLDDSLNDYFSLEHLNGDNQYFCGSCDARVDATRCIKLRTLPPVITF
QLKRCVFLPKTTAKKKITSSLSFPQVLDMRSRLAESSENELTYELSAVLIHKGSAVNSGH
YVAHIKDEKTGLWWKFDDEQVSELGTHPFDEGSSSTAQSESNGAASSGKTKDVKQSGSSS
IKSEVFSSSDAYMLMYSLRCGKKESQEGQRENPIDIANGEVASVQQPEGCYLPSHLDKWI
NDLNATFLEACKQFDLTKESQLNTLTERRQEVRTILSEAAVQSLEEQYFWISTEWLRLWA
DTISPPALDNTPLLCSHGKVLASKVTCMKRISELAWTKLESKFNGGPKLGKGDYCRECLM
DGARMVVSSDSYRDRRTFMKNIATDVLSGKCEDGNYYVSKAWLQQWVKRKNIDAPSEADA
GPTNAITCSHGELMPEQAPGAKRILVPENFWSFLVEDALKVTPEDTSGCQCFPLDSIQCS
HCTSELSEVAGVEDALRTIKAKQRQNHDKLATGKGIALTPQSRYFLLPSPWLVQWRSYIN
MTGKNSSSVPEPELLDGVINTLTCQKHTRLVERLPELVYRRGSLFQKNPSTDKLAIIPED
DWKYFCEEWGGIVEKGVSALIEAGSNTNQSASQDVIDLDQDSSPDVNMEIDNQQPIIRTF
PEVCEECIGERESCELMQKLTYSEGDVSVCLVRGKEAPKSMLNASDSSFEVDRRTSKRSR
RTNYGKHTSLTVSATTTVYQLKMMIWQLLGVMKENQELHKGTQLIDQESATLADMNIFPG
DKLWVRDTEIHEHRDIADELCDTKSGPQDIEEGFRGTLLTGDITFEAC
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgagacctaacaccaggaacaagaacaaacggccaagaccatcagacgctgctgattcc
tattctcaaattctccgaaagatccacgaagctaatgatgtaactgatgaagacgtgaac
caacttttcatgatatccaagccactttgtcaaggctgccgtgtcaacactcgtgacaac
cccaactgtttctgcggtcttgttcctccgcctaacggaagccgtaagtctggtctctgg
cagaagacttccgagatcatacaagctcttggtcctgatctctcctcggagcttcgtgat
tctgactctacgccggctggtttaaccaatctcggagctacttgctatgctaatagtata
ctccagtgtttgtacatgaacactgcgttccgtgaaggagttttctctgtcgaggttgat
gtattgagacagtatcctgtcttggatcagattgcgaggcttttcgcgcagctgtatgct
agcaaaaagtcttttgttgattcggatgcttttgtgaagacgctggagttggataatggg
attcagcaggatattcatgagttctcgactttgcttctctccttgcttgagcgttgctta
cgccattctggagtttccaaggccaaaacaattgtgcaggatctcttccgcggtagtgtc
tcgcatgtgaccacgtgctcaaaatgtgggagggagtcggaagcttcttcaaaggtcgaa
gatttttatgcccttgagttgaatatcaagggcctcaaaagtttggatgatagtttgaat
gattactttagcttggagcatctcaatggggataaccaatatttttgtgggagctgcgat
gccagagtagatgccacacgctgcattaagctgcgaaccctacctcctgttatcactttc
cagctcaaacgatgtgttttcctccctaagactacggctaagaagaagattacgtcctcg
ctttcctttcctcaagtgctggatatgcgatcgagattggcggagtcttctgagaatgag
ttgacatacgaactctctgctgtgttaatccacaaaggaagtgctgtgaacagtggacat
tacgttgctcacataaaagatgaaaagactggcttgtggtggaaatttgacgatgagcaa
gtgtctgaactgggtacacatccattcgatgaaggttcttcttcaactgcacagtccgag
agtaatggtgccgctagtagtgggaaaaccaaagatgtcaaacaatcaggttcttcttct
attaagtcggaggttttctcatccagtgatgcttatatgctgatgtacagtcttagatgc
ggtaaaaaggaaagtcaggaaggacaaagagagaaccctattgacatagccaacggagaa
gttgctagtgttcaacagccggaaggttgttatcttccgtcacatctcgataaatggatc
aatgacctgaacgcaacattccttgaggcgtgcaagcaatttgatttaacaaaggaaagt
caattgaacactttgactgaaaggaggcaagaagtacggactatactttcagaagctgct
gttcagtcacttgaagaacaatatttttggatctccacagaatggcttcgtctatgggct
gatacgatttcgccccccgctttggacaacaccccgttactttgttcccatgggaaagtt
cttgcctcaaaagttacttgcatgaagcgtatatctgaacttgcatggacgaagttagaa
tcaaagttcaatggtggaccaaagttagggaaaggggactactgcagggaatgtcttatg
gatggtgctcgcatggttgtctcttctgacagttatagggatcgaagaacattcatgaaa
aacatagcaaccgatgttctttcgggaaagtgcgaggacggaaattattacgtctctaaa
gcatggttgcagcaatgggtgaaaaggaaaaacattgatgctcccagtgaagcagatgca
gggcctacaaatgcaatcacgtgcagtcatggagagctgatgcctgagcaagcgccaggg
gccaaaagaattctagttccagagaatttctggtcattccttgttgaagatgctttaaaa
gtgacaccagaagatacttcgggttgtcaatgtttccctctggactccatccaatgttct
cattgcacatccgaactttctgaggttgcaggcgtcgaggatgcactaagaacaataaag
gccaagcagcgccagaatcacgataagttagccacgggaaagggtatagcattaacgcca
caaagccgatatttcttgttgccatctccatggctagtgcagtggaggagctatattaac
atgactggaaaaaatagttcctcagtaccagagcctgaacttcttgatggagtcattaat
actctcacatgccagaagcacactcgactcgttgaaaggctccctgaacttgtctaccga
cgtggctcattatttcaaaaaaatccatctacggataagctggcaatcatccctgaggat
gactggaagtatttctgtgaggagtggggagggatcgtggagaagggagtctctgctctt
attgaggctggtagtaatacgaatcagagtgcatcccaggacgttattgaccttgatcag
gattcttctcctgatgttaatatggagattgataatcagcagcctattatcaggacgttc
ccagaggtttgtgaggaatgcataggagagagggagagctgtgagttgatgcagaagctc
acttactctgaaggagatgtatctgtctgcctggtgcgcggaaaggaagctccaaagtcg
atgttgaatgcatctgactcgagctttgaggtggaccgtcgtacttcaaagcgttcccgg
agaactaactatgggaagcataccagcttgacagtatctgcaacgaccactgtgtaccag
ttaaagatgatgatatggcaactacttggggtgatgaaggagaaccaagaacttcacaaa
ggcacacaactgattgatcaagaatctgcaacccttgcagacatgaacatattccctggc
gacaagctttgggtgagagataccgagatacatgagcaccgcgatattgctgatgagctt
tgcgatacgaagtcagggcctcaagatatagaagaaggtttccggggcacattattgact
ggagatatcacttttgaagcctgctag
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