Brassica rapa (field mustard): 103873112
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Entry
103873112 CDS
T03449
Name
(RefSeq) chaperone protein ClpC2, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
brp03110
]
103873112
Chaperones and folding catalysts [BR:
brp03110
]
Heat shock proteins
HSP100
103873112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
nSTAND3
AAA_22
TniB
UVR
NACHT
NBD_SMAX1
AAA_18
AAA_14
Mg_chelatase
Zeta_toxin
AAA_28
AAA_25
IstB_IS21
Torsin
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
103873112
NCBI-ProteinID:
XP_009149790
UniProt:
M4DNE3
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All DBs
Position
A06:10152784..10157350
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AA seq
930 aa
AA seq
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MARLLANSTSRSLLGSGRDFQSEDYRKPRRCVKMMYTSQTSVLSIQSFSGLRASNALDRV
ARPSHDFFGKVNLQMSSSRREKASRGVTKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGVDASNIRTQVIRMVGENNEVTA
SVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILARRTKNNPCLIG
EPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEI
RQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDEAIQILHGLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLP
DKAIDLIDEAGSRVRLRHAQVPEEARELERQLRQITKEKNEAVRGQDFEKAGSHRDREIE
LRAEIAAVLAKGKEVNKAETEAGEEGGPTVTESDIQHIVSTWTGIPVEKVSSDESSRLLK
MEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY
YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEK
AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK
DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVVVRLKDKE
IELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSREIKDGDSVIVDVDA
EGSVVVLNGKNGSGDGFVAEEAMEDPIPVL
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctaggctcttggctaattctacatcccgttctttacttggttccggaagagacttt
cagtcagaagactacagaaaaccaagaagatgtgtgaagatgatgtacacttctcaaaca
tccgttttgagtatccagagcttctctggtttaagggcttccaatgcgctggatcgggtg
gcaaggcctagccacgactttttcggtaaggttaaccttcaaatgtcttcttcccggaga
gaaaaagctagccgaggtgtaacaaaagccatgtttgagcggtttaccgagaaagcaatc
aaggtcatcatgctgtctcaagaggaagctcggaggcttggccataactttgttggcact
gagcaaatactgttgggactgattggggaaggcactggaatcgctgcaaaggttcttaaa
tccatggggatcaatcttaaagattctcgtgtggaggtggaaaagatcattggaagaggc
agtggttttgtggctgtggagatcccatttactcctcgtgcaaagcgtgtcctggagctc
tcacttgaggaagctcgccaacttgggcataactacattgggtcagagcatcttctgctt
ggtcttcttcgtgaaggggaaggtgttgcagctcgtgtcctggagaatttgggtgtagat
gctagcaacatccggacgcaggttatacgtatggtgggagaaaacaatgaagtgacggca
agcgtgggtggaggatctagcggaaacagcaaaatgccaacactagaagagtatgggacc
aacttaactaaactagcagaagagggtaaactggatccagttgttggaaggcagccacag
atagaaagagtggtccagatcttggctcgaagaaccaagaacaacccttgtcttattgga
gaacctggagttggtaagacagcaatagctgaaggactcgcacagagaattgccagtgga
gatgtccctgaaacaattgaggggaagacggtgataacccttgatatgggtcttcttgtg
gctggaacgaagtaccgtggagaatttgaagaaaggttgaagaagctgatggaggagatc
agacaaagtgatgacataatcctgtttattgatgaagtgcacactctgatcggtgcagga
gccgctgaaggtgccattgatgctgctaacatcttaaagccagctcttgcaagaggtgaa
ttgcagtgtattggtgcaacaacattggatgagtacaggaagcacattgagaaagatcct
gcactggagagacggttccagcctgtcaaagtacctgaaccaactgtagacgaagctata
cagatcttgcacggtctgcgtgagcgttatgagatccaccacaagctccgctacactgat
gaagctttggttgctgctgcgcagttgtcacatcagtacatcagtgaccggtttcttccc
gacaaagccattgacttgattgatgaagctggatctcgggttaggctgcgtcacgctcag
gtccctgaggaagctagagagcttgaaaggcaactcagacagatcactaaggagaagaat
gaagctgtaagaggccaagactttgagaaggctggttctcaccgggaccgggaaatagag
cttagagccgagatagctgctgttttagccaaaggcaaagaagtgaacaaagctgagact
gaagctggcgaggaagggggacctactgtcactgaatccgacatccaacacattgtctcc
acctggacaggaatcccagtagagaaagtctcctctgatgaatctagccgtcttctcaag
atggagcagactcttcacacaagagtcattggccaagacgaagccgtcaaagccattagc
agggccatccgacgtgcacgtgttggactcaagaacccgaaccggccaatagcaagtttc
atcttctctggtccaaccggtgtggggaaatcagagcttgccaaagccttggctgcttac
tacttcggctcagaggaagcaatgatccgtctggacatgagtgagttcatggagcgacac
accgtttcgaaactcattggttcgcctcctggttacgtaggatacacggaaggaggtcag
ctaacggaggcggttagacgcaggccctacacgcttgtcctcttcgacgaaatagagaaa
gctcatcctgatgttttcaacatgatgcttcagatcctagaagatggcagactaactgac
agcaaaggaagaacggttgatttcaagaacacgcttctgatcatgacatcaaacgtagga
agcagcgtgattgaaaagggtggtagaagaatcgggtttgatctcgactacgacgagaaa
gacagcagctacaacagaatcaagagcctagtgactgaggaactgaaacagtatttcaga
ccagagttcttgaacaggttggatgagatgattgttttcagacagttgacgaagctggaa
gtgaaggagattgctgatataatgcttaaagaagtggtggtgaggcttaaggacaaggag
attgagcttcaagtgactgagaggtttaaggagagagtggtggatgaagggttcgacccg
agctacggtgcaaggccgctgagaagagcgattatgaggctgttggaagatagcatggcg
gagaagatgctttcaagggagattaaagatggagactctgtgattgttgatgttgatgct
gaaggaagtgtggttgtgttgaatggtaagaacggaagtggtgacggttttgttgctgaa
gaagccatggaggatccaattcctgtgttgtag
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