Brassica rapa (field mustard): 103873179
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Entry
103873179 CDS
T03449
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103873179
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103873179
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103873179
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103873179
NCBI-ProteinID:
XP_009149851
UniProt:
A0A3P5YY41
M4DNK2
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Position
A06:10683088..10687189
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AA seq
706 aa
AA seq
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MSNLHLHTSARFRNFPTAFSRRHHNNNDLQNQRGRSVFSELGDTTLDPSGDLITRWNHIF
LITCLLALFLDPLYFYLPIVQAGTACMSIDIGFGILVTFFRTLADFSFLIHILLKFKTAF
VSKSSRVFGRGELVIDRREIAIRYLKSEFIIDLAATLPLPQIMIWFVIPNAGEFRYAAHQ
NHTLSLVVLIQYVPRILVMLPLNRRIIKATGVAAKTAWSGAAYNLVLYLLVSHVLGSVWY
VLSIQRQHECWRRECIKEMNATHSPSCNLLFLDCGSLRDPGRQAWMRITRVLSNCDARND
DDQHFQFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSLAASTLSSETLFSCFI
CVAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPQELQERVRRFVQYK
WLTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLIDAICERLVPSLNT
KDTYVTREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALMPNI
NQNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFRRLHSKKLQHAFRYYSHQWRAWGTGF
IQAAWRRYMKRKLAMELARQEEGDDYYYDDDDDDQYGGEDMPESSNNVDDNSSNSQNLSA
TILASKFAANTKRGVLGNQRGSSRIDPDDPTLKMPKMFKPEDPGFF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctccacctccacacctccgcacgcttccgcaatttcccgacggctttctcc
cgtcgccaccataacaacaacgacctccaaaaccaacgcggccgatccgttttctccgag
ctaggtgacacaaccctcgacccaagcggtgacctaatcacgagatggaaccacatcttc
cttataacctgcctcctcgcgctcttcctcgaccctctctacttttatctccctattgtc
caagccggaacggcctgtatgtccatcgacatcggtttcggcatcctcgtcaccttcttc
cgtaccctagccgatttctccttcctcattcacattctcctcaaatttaaaactgctttt
gtctccaaatcgtctagagtctttggtcgcggcgagcttgtcattgaccgccgtgaaatc
gccatccgttaccttaaatctgagttcattattgacctcgctgccacgcttcctcttcct
cagataatgatttggtttgtgatcccaaatgcgggagaattcagatacgcagcacatcag
aaccacacactttccttggtcgtcctgatacagtacgtgcctcgcatcctcgtcatgctt
ccactaaaccgtaggatcattaaagccactggagttgcagccaaaacagcctggtccggt
gcagcctacaatctcgtgctctacttacttgtgagccacgttcttggttcggtttggtac
gttttatcgatccagagacagcacgaatgctggagaagagaatgcattaaggagatgaac
gcaacgcattcaccgtcttgtaatctcttgtttctagactgtggatcgttgcgggatcca
ggcagacaagcttggatgcgcatcactcgggttctctctaactgcgatgcacgtaatgat
gatgaccaacattttcagtttggtatgtttggtgatgccttcactaatgatgtcacttct
tctcctttctttgataaatacttctactgtctttggtggggtctccgcaatctcagttct
tatggacagagtcttgcagctagtacattgagtagtgagactttattcagttgtttcatc
tgtgttgctggccttgttttcttctctcatctcattggcaatgttcagaactatctgcaa
tcgacaacggctaggttagatgaatggagagtgagaagaagagatacagaggaatggatg
cgacacaggcaattgccacaggagttacaagagcgtgtgaggcggttcgtccaatacaaa
tggttaaccactcgtggagtcgatgaagaagccatcctccgtgctctaccattggatctt
cgtagacagatccaacgtcatctctgtctcgctctagttcgccgtgtgccattctttgca
cagatggacgaccagctcatagacgcaatatgcgagcgtttggttccatcgttgaacacg
aaagatacatacgtgacacgggaaggcgatcctgtaaacgagatgcttttcatcattaga
ggtcagatggaaagttcgactacagatggtggacggtcaggattctttaactcaatcacg
ctcagaccaggagatttctgtggtgaagagctcttaacttgggctttaatgccaaacatt
aaccagaatctccccttgtccacgagaaccgtgagaactctctctgaagtagaagctttc
gctctcagagcagaggacttaaagtttgtagctaaccaattcagacgcctccacagcaag
aaactccaacatgctttcagatactattcgcatcagtggagagcttggggaactggtttt
atacaagctgcatggagacgatacatgaagaggaagttagctatggagttagctaggcaa
gaggaaggagacgattactattatgatgatgatgatgatgatcaatacggaggagaggac
atgcctgaaagtagtaacaacgtagacgacaacagcagcaacagtcagaatttgagtgcg
acgatattagcgtctaagtttgcagctaatacgaagagaggtgttttagggaaccaaaga
gggtcttccagaattgatcctgatgatccaactttgaagatgcctaaaatgtttaaacca
gaggatccaggattcttctga
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