Brassica rapa (field mustard): 103873214
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Entry
103873214 CDS
T03449
Name
(RefSeq) RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103873214
Membrane trafficking [BR:
brp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
103873214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
103873214
NCBI-ProteinID:
XP_009149881
UniProt:
M4DNN2
LinkDB
All DBs
Position
A06:10992374..10995279
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AA seq
788 aa
AA seq
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MDAIKPLPQVSSFSASVFSFLDDRFRDAADLSQSPALVSELETEISELDQRLAGLNRQLE
SGLASYASFSDRIGGLLIGVNAKLADLSSSRSASDGGKEEETREHVAGEELPSLAKEVAQ
VESVRAYAETALKLDTLVGDIEDAVMSSLNKNLRTSRSSGFEEVRLHAIKTLQKTEEILS
LVAKKHPRWGRLVSAVDHRVDRALAMLRPQVIADYRALLTSLGWPPQLSNLTSSSLDSKS
DDVQNPLFNMEGNLKTQYCGNFHALCSLQGLQLQRKSRQLGSHKGENVLFHQPLWAIEEL
VNPLTVASQRHFAKWSEKPEFIFALVYKITRDYVDSMDELLQPLVDKAKLAGYSCREEWV
SAMVSSLSLYLVKEIFPTYVGQLNEPDLSSEAKVSWLHLIDLMISFDKRVQSLVSQSGIL
SLQEDGNLLRISSLSVFCDRPDWLDIWAEIELEEKLVKLKAEMDNDRNWTVKVQDELIST
SNVYRPPIVSSILLQHLSSIIERSKSVPAIYLRARFLRLAASPTIQKFLDCLLLRCQEAE
GLTALTENNDLIKVASSINAGHYIESVLEEWCEDVFFLEMGNGQDNPQEAPGQENFTEPS
EGIFGEEFEKLEKFRLEWINKLSVVVLRGLDARTREYIKNRKQWQEKRDKEWTVSRALVG
ALDYLQGKTSIIEENLNKADFTATWRSLASEIDKLFFNSILMANVKFSDDGVERFREDME
VLYGVFRAWCVRPEGFFPKLSEGLTLLKMKEKQVKEGLTRGEKWLRENGVRYLSEAEAKK
IAKSRVFS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgatcaagccacttcctcaggtctcgagcttctccgcttcagtctttagcttc
ctcgatgacaggttcagagacgccgcggatctctcccaatcacccgctctggtctccgaa
ttggaaaccgagatttccgaattggatcagagattagccgggctgaaccgccagctcgag
tccggtttagcttcgtacgcttcgttctccgatcgcatcggcggtctactcatcggagtc
aatgccaaattagctgatctctcttcttctcgctccgcgtcagatggcggaaaggaggag
gagacgagggagcatgtagctggggaggagcttccatcactggctaaagaagtagcacaa
gttgagtctgtgcgggcttatgctgagactgcattaaagctagatactttagttggtgat
atagaggatgctgtcatgtcttctttgaataaaaacttgcgaacatctcggtcaagtggt
tttgaagaagtgcgtctacacgctatcaaaacacttcaaaagacagaagagatactgagt
ttagtggcaaagaagcatcctcgctggggacgtcttgtttctgcagttgatcatagagtg
gatagagctttagctatgctgagacctcaagtgatcgctgattatagagcgttgcttact
tctcttggatggccacctcagctttctaacttaacttcatcgagccttgattcgaagtct
gatgatgtccaaaatccgcttttcaacatggaagggaacctcaaaactcagtattgtgga
aacttccatgctctgtgtagcctgcagggtctgcagctgcaaagaaagtcgcggcagctt
gggagccataagggtgaaaatgttctcttccaccagccactctgggctattgaagagctg
gttaaccctctgactgttgcatctcagcgacattttgcaaagtggagcgaaaagcctgaa
ttcatttttgcacttgtgtataaaatcacaagggactatgtggactctatggatgagtta
ctgcaaccgcttgttgataaagcaaaactagctgggtacagttgcagagaagagtgggtt
tcggctatggtgagctcattgtctttgtacttggtgaaagagatattccctacttatgtt
ggtcagctaaacgaacctgatcttagttctgaggctaaggtttcgtggctccatctcatt
gacctgatgatctcttttgataagcgagtccagtctctggtatctcaatcaggaatactt
tcgcttcaagaagatgggaatcttctgagaatctcctctctttcagttttctgtgacaga
cctgattggctcgatatatgggcagagatagagctagaggagaagctcgtcaagttaaag
gcggagatggataacgacagaaactggacggtgaaggttcaagacgaactcatctccact
tcaaacgtttacagaccaccaattgtttccagcatccttctgcagcacttgtcatcaatc
atagaacgatccaaatcagtgcctgccatttacttgagagcaaggttcctgagactggca
gcctcgccaacaatccagaagttcttggattgccttcttctcaggtgccaagaagcggaa
ggactaacggctttaaccgaaaataacgatctaatcaaggtcgcaagctctatcaatgct
ggtcactacattgaatcagtcttggaagaatggtgtgaggatgtctttttcctcgaaatg
ggaaatggacaggacaatccacaggaagctccgggacaggagaactttacagaaccttct
gaaggtattttcggagaagagtttgagaagctggagaagttcagactagagtggataaac
aagttgtctgtggtggtcttgagaggccttgatgctcggactcgagagtacattaaaaac
agaaagcaatggcaggagaagagagacaaagagtggacggtgtcgagggcactagtcggg
gctctagactacttacaaggcaaaacgtcgataatagaagaaaatctaaacaaagcagac
tttacagctacgtggaggagtctagcctcagagatagacaagctgttcttcaacagcatc
ctgatggcgaatgtgaagttttctgatgatggagtcgaaaggtttagagaggacatggag
gttctatatggggttttcagggcgtggtgtgttagaccggaagggttcttccctaaacta
agcgaggggctaacacttctgaagatgaaagagaagcaagtaaaggagggtctgaccaga
ggcgagaaatggttacgtgagaatggggttcgatatttgagtgaagccgaagccaagaag
atagcaaagagtagagtgttctcttaa
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