Brassica rapa (field mustard): 103873307
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Entry
103873307 CDS
T03449
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103873307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103873307
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103873307
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
U-box type E3
103873307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MCAfunc
HEAT_2
Neurochondrin
KAP
zf-RING_UBOX
zf-Nse
MLKL_N
RPW8
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-NOSIP
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
103873307
NCBI-ProteinID:
XP_009149975
UniProt:
M4DNX4
LinkDB
All DBs
Position
A06:11780567..11783236
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AA seq
651 aa
AA seq
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MEEEKGAVAQSLIDLVTEIASVSDYRIMVKKLCSNLARRLKLLVPMLEEIRESNDPISEE
TLGTLVSLKEALSSAKDHLKFCSGGSKIYLVMEREQVTSKLQEVSVQLEQSLSKIPYEDL
DISDEVKEQVELVLSQFRRAKGRVDASDDELYQDLHSLCIKSSDVDDHQPALQRVANKLQ
LMEIPDLAQESVALHEMVALSGGENIEEMAMVLKLIKDFAQMDNSDDHKVNGQTSTAASQ
KIPAVIPDDFRCPISLEMMRDPVIVSTGQTYERTCIDKWIEAGHSTCPKTQQALTSTTLT
PNYVLRSLIAQWCEANDIEPPKPPCSFRPSKVSSFSSPAEANKIEDLMWRLAYGNPEDQR
SAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLNLSICENNKGA
IVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTH
RGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILASHPEG
KSIIGSLDAVPSLVEFIRTGSPRNRENAAAVLVHLSSNDPQHLVEAQKLGLMGPLIDLAG
NGTDRGKRKAAQLLERISRLAEQQKETAAHEQTKEEAEPTDSASTTEAADP
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaaaggtgccgttgcgcagagcttaatcgatctagtgaccgagattgcg
tctgtttccgattaccgtataatggtgaagaagctatgcagcaatctagcgaggaggttg
aagctgctagtcccgatgttggaggaaattagagaaagcaacgaccccatcagtgaagaa
acgttggggacgctggtctccttgaaagaagccttgagctcggccaaggatcatctcaaa
ttctgcagcggagggagcaagatctatctggtcatggagagagaacaagtgacgagtaag
ctgcaggaggtttcagttcagctggaacaatctttaagtaagattccttatgaggatctt
gacatatcagatgaagttaaagaacaggttgagctggttctgagtcagtttcggcgagcc
aaaggaagagtagatgcatcagacgatgagctttatcaagatcttcactcattgtgtatc
aaaagcagtgatgtggatgatcaccagcctgccctgcagcgggttgcaaacaagttacag
ctgatggagattcctgacttagctcaagaatcggtggctctgcacgaaatggtcgctttg
agcggtggtgaaaacatagaggagatggcaatggtgctgaagctgattaaggattttgcg
cagatggacaacagcgacgaccataaagtaaatggacaaacttccacggctgcgagtcag
aagatacccgccgtgattcccgatgattttcgctgcccaatatctctggagatgatgaga
gatccagttattgtttcaacagggcagacctacgaacgcacctgcattgacaagtggata
gaagctgggcactcgacatgtcctaaaacacagcaggcgctaacaagcacaacgctcaca
cctaactatgttctccgtagtctcatagctcagtggtgcgaggctaatgatattgagcct
ccaaaacctccttgcagttttaggcccagcaaagtatcgtccttctcctccccagctgag
gcaaacaagatcgaagatcttatgtggagactcgcttacggtaacccagaggaccaaaga
tctgcagctggggagatccgcctccttgcaaaacgaaatgcagacaaccgtgtggccata
gccgaagctggagccatacctcttctcgtcggccttctcgcaactcctgattctcgtatc
caagaacattctgtcacagctcttctcaacctctccatatgtgagaacaacaaaggagcc
attgtttctgctggagctatccctggtatagttcaagttctcaagaaaggaagcatggag
gctagagagaatgcggctgctacgctttttagtctctccgtgattgacgaaaacaaagtc
actatcggtgccttgggagcaatcccacccctcgttgtgctgcttaacgaaggcacgcat
agaggcaagaaagacgctgctactgcacttttcaacctctgcatataccaaggaaacaaa
ggaaaggccatacgagcgggagtgattcccaccttgactagactcttaacagagcccgga
agcggaatggtcgatgaggcgctggcgattctggccattctcgctagccatcccgaaggg
aaatccatcataggatcactggacgccgtcccgagcctggtggagtttatcagaacgggt
tcccctagaaacagagagaacgcagctgcggttctagttcacctcagctctaatgaccca
caacatctggtggaagctcagaaactcggccttatgggtccgttgatagatttagccgga
aatgggacagatagagggaaaagaaaagcagcccagttgcttgaacgtataagccgtcta
gctgaacagcagaaggagacggctgctcatgaacaaaccaaagaagaagctgaaccaaca
gattcagcatcaaccacagaagctgctgatccttga
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