Brassica rapa (field mustard): 103873468
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Entry
103873468 CDS
T03449
Name
(RefSeq) calnexin homolog 1
KO
K08054
calnexin
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04141
Protein processing in endoplasmic reticulum
brp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103873468
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103873468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
brp03110
]
103873468
04131 Membrane trafficking [BR:
brp04131
]
103873468
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
brp04091
]
103873468
Chaperones and folding catalysts [BR:
brp03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
103873468
Membrane trafficking [BR:
brp04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
103873468
Autophagy
ER-phagy
Other ER-phagy associated proteins
103873468
Lectins [BR:
brp04091
]
L-type lectins
103873468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Vma12
OAD_gamma
CFAP143
Motif
Other DBs
NCBI-GeneID:
103873468
NCBI-ProteinID:
XP_009150122
LinkDB
All DBs
Position
A06:complement(17641460..17644180)
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AA seq
531 aa
AA seq
DB search
MMRNRQLLSGLLLTLAFVSLQKLCYCDDQTVLYESFDEPFEGSWIVSKNGDYEGVWKHAK
SEGHDDYGLLVSEKARKYGIVKELEEPLNLKDGTVVLQYEVRFQEGLECGGAYLKYLRPQ
DAGWTAEGFNSESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKFPPSVPHDKL
SHVYTAILKPDNEVSILVDGEEKKKANLLSGEDFEPALIPDKTIPDPEDKKPEDWDERAK
IPDPSAVKPDDWDEDAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEA
PKIDNPKCETAPGCGEWKRPMKKNPAYKGKWSAPLIDNPAYKGIWKPRDIPNPDYFELDR
PDYEPIAAIGIEIWTMQDGILFDNMLIAKDEKVAETYRQTTWKPKFDVEKEKQKAEEEAA
GSADGLKSYQKVVFDLLNKVADISFLSAYKSKITEVIEKAEEQPNLTIGVLVSIVIVFFS
LFIKLIFGGKKAAATVEKKKPEVGESSKSEDETEKKEETAAPRKRQPRRDN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaaccggcaactattatccggccttttgcttaccttagctttcgtttcgctc
cagaagctttgctactgtgacgatcagacggtgttgtatgaatcgttcgatgagccattc
gaaggtagctggatcgtttcgaagaatggtgattacgaaggtgtgtggaagcatgcaaag
agtgagggacatgatgattatggacttctcgtaagcgagaaggcccgtaagtatggtata
gtgaaagagcttgaggagcctctaaacctcaaggatggaacagttgttcttcagtacgag
gttcgtttccaggaggggcttgagtgtggtggtgcttacttgaaatacctccgtcctcaa
gatgctggatggactgctgaggggttcaatagtgaatctccttactccatcatgtttggg
cctgacaagtgtggagccacaaacaaagtgcacttcatcttgaagcacaagaatcccaag
agtggcgagtacgtcgagcaccacctcaagttccctccctctgttcctcatgacaagctt
tctcatgtctacaccgccatcttgaagcccgacaacgaggttagcattttggttgatgga
gaggagaagaaaaaggctaatttactctctggagaagactttgagcctgctttgatccct
gacaagaccatccctgaccctgaggacaagaaaccagaagactgggatgaaagagccaag
attcctgatcctagtgccgtgaagcctgacgactgggacgaggatgcacccatggagatc
gaagatgaggaagctgagaaaccagaaggatggttagatgatgagcctgaggaggttgac
gacccagaggcgaccaaacctgaagattgggatgatgaggaagatggtatgtgggaggct
ccaaagattgacaaccccaagtgtgaaacagcaccaggttgtggtgaatggaagagaccg
atgaagaagaaccctgcttacaagggaaagtggagtgcacctctcatagataaccctgct
tacaagggaatctggaaacccagagacatccctaaccctgactactttgagctagacaga
cccgattatgaacccattgcagccataggtatagagatctggacaatgcaagacggtatc
ttgtttgacaacatgttgatagcgaaagacgagaaagtcgccgagacttacagacagacc
acttggaagcctaagtttgatgttgagaaagagaaacaaaaggcagaagaggaagctgct
ggctctgcagatggtctcaagagctaccagaaggttgtgttcgacctcttgaacaaggtt
gcagacatttctttcctaagtgcgtacaagtctaagatcacggaagtgattgagaaagct
gaggaacaaccaaacttaaccattggtgtcctcgtctccattgtcatagtatttttctcg
ctcttcatcaagcttatcttcggtgggaagaaggcggcagcaactgtggaaaagaagaaa
ccagaagtaggagagagctcaaaaagtgaagatgagacagagaagaaggaagaaaccgct
gctccacgcaaaaggcaaccgagacgtgataattag
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