Brassica rapa (field mustard): 103873488
Help
Entry
103873488 CDS
T03449
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103873488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103873488
Spliceosome [BR:
brp03041
]
Common components
Common spliceosomal components
SR proteins
103873488
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
DUF2457
RAP1
Motif
Other DBs
NCBI-GeneID:
103873488
NCBI-ProteinID:
XP_033129986
LinkDB
All DBs
Position
A06:17484291..17488267
Genome browser
AA seq
292 aa
AA seq
DB search
MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAED
AVDGRDGYNFDGCRLRVELAHGGRGQSSGDRRGGYRGGGGYGGGGGSARFGVSRHSEFRV
IVRGLPSSASWQDLKPSFQDHMRKAGDVCFAEVTRDSDGTYGLVDYTNYDDMKYAIRKLD
DTEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRSRGRGRSPSRSISRSRSPRKDLSKSP
RRSLSRSISKSRSPSPDRKKSPPRAMSKSRSRSRSRSRSLSKSPAKVREGSG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtttttctcggtccatctatgtcggtaacttgcccggcgacattagggag
tctgagattgaagatctcttttacaagtatggccgcatagttgatattgaattgaaggtt
ccacctcgccctccatgctattgctttgttgagtttgagcatgctcgggatgcggaagac
gccgtcgatggccgtgatggctacaactttgacgggtgtcgcttgagggttgagcttgcc
catggtggtcgagggcagtcttcaggtgatcgtcgtggtggataccgtggtgggggtggc
tatggtggtggaggtggatctgcccgctttggcgtctcacgacactctgagttccgagtt
attgtgcgtgggcttccatcatctgcttcatggcaagatttgaagccgtcatttcaggat
catatgcggaaagctggtgatgtgtgctttgctgaggtcactcgtgacagtgatggaacg
tatggtcttgttgattacaccaattatgatgacatgaagtatgctataaggaaacttgat
gatacagagttcagaaacccctgggccagaggctatatcagggttaagaaatacgaaagc
tcccagtcgagaagcccaagcagaagcaggagtcgaagccgtagccgaggccgtggtcgc
agccctagccgcagcattagcagaagcaggagcccaaggaaggatcttagcaaatcacca
agacgttccctttccagatcgatatcaaaatctagatctccatctcccgacaggaagaag
agtcctcctagggcaatgtcgaaatcgaggtccaggtccaggtccaggtccaggtctctt
tcaaaatctcctgccaaggttcgggaaggcagtggatga
DBGET
integrated database retrieval system
