Brassica rapa (field mustard): 103873570
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Entry
103873570 CDS
T03449
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103873570
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103873570
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103873570
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103873570
Spliceosome [BR:
brp03041
]
Common components
Common spliceosomal components
SR proteins
103873570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103873570
NCBI-ProteinID:
XP_009150254
LinkDB
All DBs
Position
A01:1383004..1385062
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AA seq
237 aa
AA seq
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MADSRHEERDSRSPSPRKQRSLSRSRSRSRSRSVPRARSRSRSRSLPRPISPSRNRGRRS
EVENPGTTLYVTGLSTRVTDKDLESHFSKEGKVASCFLVMEPRTRESRGFAFVTMDTVKD
ADRCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDNDRDGRSSRGRHSDRD
SYGHRRSPRRDYSPRGGGRRSPPRREYSPRGGGRSSRRDRSYSPYGRSPERRSERRY
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcgtcacgaagaaagagattcacggtctccttcaccacggaaacaacgg
tccctttccaggtccaggtccaggtctaggtctagatccgtgccgagggctaggtctagg
tctaggtctagatctttgccaaggcctatatctccatcaagaaaccgtggaaggaggtct
gaagttgaaaaccctggtaccactctatatgtgactggcctatccacaagagtcactgac
aaggatcttgaatcacatttctccaaggaaggcaaggtagcgtcttgctttcttgtaatg
gagccgcgcactcgtgagtctcgtggttttgcctttgttactatggataccgtcaaagac
gctgaccgttgcatcaagtatctcaaccagtctgttctagaaggccgttacatcactgtc
gaaaggtcccgaagaaagcgcccccgaactcccacccctggccactatcttggcctgaaa
agctccagagacaatgaccgagatggccgtagcagtcgagggaggcacagtgatcgtgat
agttacggacaccgtaggtcaccaagacgcgactattcacctcgtggtggtggaaggagg
tcaccaccaagacgtgagtattcgcctcgtggtggtggaagaagttctagaagagatagg
tcttactctccttatggaagaagcccagagagaaggtccgagagaaggtattaa
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