Brassica rapa (field mustard): 103873693
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Entry
103873693 CDS
T03449
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103873693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103873693
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103873693
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
U-box type E3
103873693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
KAP
zf-Nse
zf-RING_UBOX
MCAfunc
zf-C3HC4_4
MLKL_N
RPW8
zf-C3HC4_2
zf-C3HC4
zf-NOSIP
HpHbR
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
103873693
NCBI-ProteinID:
XP_009150335
UniProt:
M4EYC8
LinkDB
All DBs
Position
A01:14985225..14987989
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AA seq
658 aa
AA seq
DB search
MEEEKGAVAQSLIDVVNEISSVSEYRTTVKKLCSNLARRLKLLVPMFEEIRESNEPISED
TLKTLVSLKEAMSSAKNHLKFCSQGSKIYLVMEREQVTSKLLEVSVQLEQSLSKIPYEDL
DISDEVREQVELVLSQFRRAKGRVDASDDELYEDLQSLCIKSSDVDDYQPTLQRVARKLH
LMEIPDLAQESVALREMVASSGGESIEEMAMVLKLIKDFVQIDTDNSEDQSAGVNSSSNG
QTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSTGQTYERTCIEKWIEAGHSTCPKTQQA
LTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAY
GNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLNLSI
CENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVV
LLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAI
LSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSVDPQHLVEAQKLGLMG
PLIDLAGNGTDRGKRKAAQLLERISRLAEQQKETAAQAQNTEEAEPTHSASTTEAADT
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaaggtgcggttgcgcagagcttaattgatgtagtgaacgagatttcg
tccgtttccgagtaccgtacaacggtgaagaagctctgcagtaatttggcgaggaggttg
aagctgcttgttccgatgttcgaggaaatcagagagagtaacgagccgatcagtgaagat
acgttgaagacgttggtctccttgaaggaagccatgtcctcggccaagaatcatcttaaa
ttctgcagccaaggcagcaagatttatctggtcatggagagggaacaagtgacaagtaaa
ttgctggaggtttcagttcaattagagcaatctttgagcaagattccgtatgaggatctt
gacatctccgatgaagttagagaacaggttgagttagttctcagccagtttcggcgagcc
aaaggaagagtagatgcatcagacgatgaactgtatgaagatcttcagtcactgtgcatc
aaaagcagtgacgtagatgattatcaacctaccctgcagcgggttgctaggaagttacat
ctgatggagattcctgacctagctcaagaatcagtggctctgcgcgaaatggttgcttcg
agcggtggtgaaagcattgaggagatggcaatggtacttaagctgattaaggattttgtg
cagattgacactgacaatagcgaggaccagagtgctggggtaaactcgagtagcaatggg
caaacttctacggctgctagtcagaagataccggtgattcctgatgatttccgctgtcca
atatctctggaaatgatgagagatccagttatcgtttcaacagggcagacctacgaacgc
acctgcatcgagaagtggatagaagctgggcattcgacatgtccaaaaacacagcaggcg
ctaacaagcacaaccctcacacccaactatgttctccgaagtctgatagctcagtggtgc
gaggccaatgatatcgagcctccaaaacctccgagcagtttaaggcccaggaaagtatca
tccttttcctccccagcagaagcaaacaagatcgaagatcttatgtggaggctggcttac
ggaaaccctgaggaccaacgatctgcagctggagaaatccgcctccttgcaaaacgaaat
gcagacaaccgtgtggccatagctgaagctggagccatacctcttctcgttggcctcctc
gcaactcctgattctcgtatccaagaacattcggtaacagctcttctaaacctctccata
tgtgagaacaacaaaggagccattgtctctgctggagctatccctggtatagttcaagtg
ctcaagaaaggaagcatggaggctagagagaatgcagcggccacactcttcagtctctcc
gtgattgacgagaacaaagtgactattggtgccttgggagcaatcccaccgctcgttgta
ctgctcaatgaaggtacacaaagaggcaagaaagacgcggctactgcacttttcaacctc
tgcatatatcaaggaaacaaaggaaaggccatacgcgcaggagtgattcccacattgacg
agactcttaacagagcccggaagcggaatggtcgatgaggcgcttgccattctggcgatt
ctctcgagccatcccgaagggaaagcaatcataggatcatccgacgctgtcccgagtcta
gtggagtttatcagaactggatctcctagaaacagagagaacgctgctgcggttctagtc
cacctctgttctgttgacccacaacatctggtcgaagcacagaaactcggtcttatgggt
ccattgattgatttagccggaaacgggacagatagagggaaaagaaaagcagctcaattg
cttgaacgtataagccgtctagctgaacagcagaaggagacggcagcacaagcacaaaac
acagaagaagctgaaccaacacattcagcatccaccacagaagctgctgatacttaa
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