Brassica rapa (field mustard): 103873814
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Entry
103873814 CDS
T03449
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03030
DNA replication
brp03410
Base excision repair
brp03420
Nucleotide excision repair
brp03430
Mismatch repair
brp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103873814
03410 Base excision repair
103873814
03420 Nucleotide excision repair
103873814
03430 Mismatch repair
103873814
03440 Homologous recombination
103873814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brp03032
]
103873814
03400 DNA repair and recombination proteins [BR:
brp03400
]
103873814
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103873814
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
103873814
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
103873814
MMR (mismatch excision repair)
DNA polymerase delta complex
103873814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
103873814
NCBI-ProteinID:
XP_009150464
LinkDB
All DBs
Position
A06:19191259..19198285
Genome browser
AA seq
1090 aa
AA seq
DB search
MNRGGKSKKRPLPSTTLPPGKHRATGTPSPSPVVGTLEEEFVDEDVFVDEIDEESLILRD
MEEREALSARSSTWARPPLSPAYLANSQSIIFQQLEIDYVIKEIHKELLPGSSGQAAVIR
IFGVTREGHSVCCFVHGFEPYFYIACPPGMGPDDISRFHQSLEGRMRESNKNANVPKFVR
HIEMVQKKSIMYYQQQKSQTFLKITVALPTMVASCRGILDRGIQIDGLGMKSFQTYESNI
VFALRFMVDRDIVGGNWIEVPAGKYKKDARTLSYCQLEFHCLYSDLISHAPEGEYSKMAP
FRVLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGEDQPFIRNVMTLNSCAPIVGVDVM
SFETERKVLLAWKDFVRDVDPDIIIGYNICKFDLPYLIERAAALGIEEFPLLGRVKNSRV
RMRDSTFSSRQQGTRESKETTIEGRFQFDLFQAIHRDHKLSSYSLNSVSAHFLSEQKEDV
HHSIITDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMCIYNYVEMARVTGVPISFLLAR
GQSIKVLSQLLRKAKQKNMVLPNAKQSGSEQGTFEGATVLEARTGFYEKPIATLDFASLY
PSIMMAYNLCYCTLVTPEDVRKLNLPPEHINKTPSGETFVKQSLQKGILPEILEELITAR
KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQM
IEQTKKFVEDKFTTLGGYEYNAEVIYGDTDSVMVQFGVPDVEAAMTLGKEAAEYISGTFI
KPIKLEFEKVYFPYLLINKKRYAGLVWTNPQKFDKMDTKGIETVRRDNCLLVKNLVTESL
NKILIDRDVQGAAEYVKNTIADLLMNRIDLSLLVITKGLTKTGDDYEVKSAHGELAERMR
KRDAATAPNVGDRVPYVIITAAKGAKGYEKSEDPIYVLENNIPIDPKYYLENQISKPLLR
IFDPVLKNASSELLHGDHMRSISITTPSNSGIMRFAKKQLSCVGCKVPISTGTLCARCKG
REAELYCKNVSQVSDLEELFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRMKAQKDMAT
AKQQLDRWSF
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagggggaaagtccaaaaagcgaccgcttccgtcgactaccttaccgccgggg
aaacaccgcgccacgggtactccgtcaccgtccccagtcgtcggaaccctagaagaagaa
ttcgtcgacgaggatgtgttcgtcgacgaaatcgacgaggaatccctaatccttcgcgat
atggaagagcgtgaagccctatccgcacgctcatccacttgggctcgacctcctctctca
cccgcttatctcgcgaactcgcagagtatcatttttcagcaattggagattgattatgta
atcaaggagattcataaggagcttttacctggttcatctgggcaagctgcagtcatcagg
atcttcggggtaaccagagaaggtcatagtgtgtgttgctttgttcatgggtttgagcct
tacttttacattgcttgccctcctggaatgggcccagacgatatctctcgtttccatcag
agtcttgagggaaggatgagggaatccaataagaatgccaacgttccgaagttcgtacgt
catatagaaatggtgcaaaagaaaagcattatgtattaccaacagcaaaagtcccaaact
tttctcaagattactgttgcgttaccgactatggtggctagctgtcgcggcatccttgat
agaggcatacagattgatggactgggtatgaagagtttccaaacttacgagagcaatatt
gtttttgctctccgtttcatggttgaccgcgatatcgtgggaggaaactggatcgaagtg
cctgctgggaaatataagaaggacgcaaggactttgtcttactgccaattggagtttcat
tgcctgtactcagatttgatcagtcatgctccagaaggtgaatactcaaaaatggctcca
ttccgtgtgctaagtttcgatattgagtgtgctggtcgtaaaggacactttccagaggct
aagcatgatcctgtgatccagatagccaatcttgtaactcttcagggagaggatcaacca
tttatacgcaatgtcatgactcttaactcatgtgctccaatcgtaggcgtagatgttatg
tcttttgaaacagaaagaaaggtcttactagcttggaaggattttgttcgtgatgttgat
cctgatatcatcattggctataacatctgcaaattcgatttaccttatctgattgagaga
gctgcagcactgggaatcgaggaatttcctcttcttggtcgtgtaaagaacagtagggtc
cggatgagggactcaacgttttcatcaagacaacaaggaacaagggaaagtaaggagacc
acaattgaaggacgatttcagtttgacctttttcaggctattcacagagaccacaaatta
agttcctattcgctgaattctgtctcagctcactttctatccgagcagaaagaggatgtc
caccattctataataaccgatcttcagaatgggaatgcggaaaccaggaggcgtcttgct
gtttattgtttgaaggatgcatatctccctcagcggcttctcgacaaactgatgtgtata
tataattatgtcgaaatggctcgtgtgactggtgttcctatttcttttcttcttgctaga
ggacagagtatcaaggttctatctcagcttcttaggaaagctaaacagaagaacatggtt
cttccgaatgctaaacagtcagggtctgaacaaggaacttttgaaggcgcaactgttcta
gaagcaagaacaggtttctatgaaaagccaattgcaactctggattttgcttcattgtac
ccgtcaattatgatggcatataatttgtgctactgcaccttggtgacacctgaagatgtg
cgcaaactgaatcttccacctgagcatatcaataaaactccatcaggggaaacatttgtt
aagcaaagtttacaaaagggtatacttccagagattcttgaagagctcattactgcccgt
aaaagagctaaagcagatttaaaggaggctaaggatccgcttgagaaggctgttttagat
ggtagacaattggcattaaagatcagtgcaaattctgtctacgggtttacaggagccact
gttgggcagttaccttgcttagaaatatcatcaagcgtgactagctatggtcgtcagatg
attgaacaaacaaagaaattcgtggaagataaattcacaacattgggagggtatgaatac
aatgcagaggtcatttatggagacacggattcagtcatggtgcaatttggcgtaccggat
gtagaagctgcgatgaccttggggaaggaagctgcagaatatattagtggaacttttatc
aaacctatcaaattggagtttgagaaggtttattttccatatttgctgatcaacaagaag
aggtatgctggtttggtgtggactaatcctcaaaagtttgacaaaatggacaccaaggga
atcgagacagtacgaagggataattgtttactggttaagaaccttgtcactgagagtctt
aacaaaatactaatcgatagagatgttcaaggcgcagctgagtatgttaaaaatacaatt
gcggatcttctcatgaaccgtatcgacttatcacttttggtgattactaagggtctaact
aaaacaggagatgattatgaagttaaatcagctcatggtgagcttgctgaacgcatgcgt
aagagggatgctgctacagcgccaaatgttggcgaccgggtaccatatgttattattaca
gcagccaaaggtgccaagggttatgaaaagtcagaagatccgatctacgtacttgagaat
aacatccctatagacccaaagtattacctagagaatcagattagcaagccgcttcttagg
atttttgacccggtcttaaaaaacgctagcagtgaacttctccatggagatcacatgagg
tcaatatcaattactactccttcgaacagcggcataatgagatttgccaagaaacaactg
agctgtgttggctgcaaagtgccgatcagcactggaacattgtgtgcacgttgcaaggga
agagaagccgagttatactgcaaaaacgtgtcacaggtgtcggacctagaagagctcttt
ggaaggctgtggacacagtgtcaggaatgccaaggctctcttcaccaagatgtcttgtgc
accagtcgagattgtccaatattttaccggagaatgaaagcacaaaaagacatggccaca
gccaagcaacaactcgaccgttggagcttctaa
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integrated database retrieval system
