Brassica rapa (field mustard): 103873979
Help
Entry
103873979 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103873979
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103873979
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103873979
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103873979
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103873979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
103873979
NCBI-ProteinID:
XP_009150635
UniProt:
M4E6I2
LinkDB
All DBs
Position
A06:20036592..20040320
Genome browser
AA seq
767 aa
AA seq
DB search
MSPFLLIGCLMLAFLLIRRQWRSAAVKREEVLRLISLATEESYLAAEKKEEEARATVDYY
GSSSVPPDVYSCAVCHYPTTTRCAQCKSVRYCSSKCQILHWRRGHKEECRPPPLHDFDRE
EDKSVKSDDGEETNIELPSRGTEFESSAADDGLTGIETNERVNNDGVSVDLACDISTSRS
SVQKVQPKSEAVDFTTSLNEKDNFYETKPISRKKSHNRTEKVESSRKHSKGKSVLFTDAK
PQNSRRSVDTVQVSASNHPFSVEHEGEKIALGHGKTTSEPSSSAPSAALSFSTIPLPSKA
ISKPRVSQASSSSSVLKTSMQKVVQHFRPPKSSKLTQPSTSVNEMSFSYEMFVKLYRDRI
ELQPFGLVNLGNSCYANVVLQCLAFTRPLISYLIRGIHSKACRKKSWCFVCEFEFLILKS
RGGESPLSPIKILSRLQKIGKHLGPGKQEDAHEFLRCAVDTMQSVFLKEADAAGPLAEET
TLVGLTFGGYLHSKIKCMKCLHKSERTELMMDLTVEIGGDIGSLEEALAQFTAYEVLDGE
NRYLCDRCKSYQKAKKKLMILEGPNILTVVLKRFESDNFGKLSKPIHFPELLDISPYMSN
PNHGDHHPMYSLYAVVVHLDATSYSGHYVCYIKNLHGDWFKIDDSNVFPVPLQTVLLEGA
YMLLYARDSPRPVSKNGGGRKSKERRNLSAIPSRHDNNSKKKQEKDSSSSLLPRVDLSSG
SLSSMFSSSETTSSCSTKDSSGFENLSDYLFGGVEQVWNQDPSSQRV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtctccttttctcctaattggatgcctgatgctggcttttctcctaatccgccgccaa
tggagatccgccgccgtgaagcgggaggaggttcttcggcttatctctttagccaccgag
gaatcttatctggcagcagagaaaaaggaggaggaggctcgtgccactgtggactactac
ggctcctcttctgttcctccagatgtttatagttgcgctgtttgtcactacccaacaact
actcgctgcgctcaatgcaaatctgttcgctactgttctagcaagtgtcagattcttcat
tggcgacgaggtcacaaggaagagtgtcgaccgcctcctcttcatgatttcgacagagaa
gaggataagtctgttaagtctgatgatggggaagaaacaaatattgagttgccatctcgt
gggactgagtttgaatcatcagcagcagatgatgggctaactggtatagagaccaacgag
agggtgaataatgatggcgtgtcagttgatcttgcctgtgacatctctacaagtaggtct
agtgttcaaaaggtacaacccaagtctgaagctgtggacttcactacttctctaaacgaa
aaagataatttctatgagacgaagccaataagcaggaagaagtcacataatcgcacagag
aaggtcgaatcatctagaaagcattccaaagggaagagtgttctatttactgatgcaaag
ccgcaaaattcacgtaggtcagttgatacggttcaagtgtcagcttcgaatcatcctttt
tcagtggaacatgaaggagaaaagattgcacttggacatgggaaaacgacatctgaacca
tctagtagtgctccttctgctgcgctgtcgttttcaactattcctttaccttcaaaagct
attagtaaacctagagtatcacaagcttcttcaagtagtagtgtcttgaaaacatcgatg
caaaaagttgttcagcattttagacccccaaagtcgtctaaactaactcaaccttccact
tctgtcaatgagatgagcttctcttatgagatgtttgtcaaactttaccgtgatagaata
gagttacagccatttggccttgtcaacttggggaacagttgttatgcaaatgttgttctc
cagtgcttggccttcactcggccacttatttcttatctaattaggggaatacattctaaa
gcgtgtcgaaagaagagttggtgttttgtttgtgagtttgagttcttaattttgaagtca
aggggaggagaatctcctctgtcacctatcaaaatcttatcaagattacaaaagattggg
aagcatcttggccctggaaagcaagaagacgctcatgaatttttaaggtgtgctgttgat
acaatgcaatctgtttttctcaaagaggctgatgcagctggtccgttggcagaagaaact
actttagtaggccttacgtttggtggttaccttcactccaagattaaatgcatgaaatgc
ctgcacaaatctgagagaacggagctgatgatggatctaactgttgagattggtggagac
ataggaagcctagaagaagcacttgctcagtttacagcctatgaagtcctagatggagag
aaccggtacttgtgtgacagatgtaaatcttaccagaaagccaaaaagaagttaatgata
cttgaaggacccaatattcttactgtggtgttgaaacgttttgagtctgataactttggg
aagctgagtaaacccattcattttcctgagcttctcgatattagtccatacatgagtaac
ccaaatcatggggatcatcatccaatgtatagtctctatgcagtggtggtccatttagat
gccacttcatattcaggtcattatgtttgctacatcaaaaaccttcatggagactggttc
aagattgatgacagcaatgttttcccggttccattacagactgtgttactagagggagca
tacatgcttctctatgcaagagattctccaagaccggtgagcaagaacggtggtggtcgg
aaatcaaaggaaagaagaaacttgtctgcaatcccgtcgagacacgacaacaacagcaag
aagaagcaagagaaagacagtagcagcagtttgttgccaagagtagatttgtccagtgga
agtttatcatcaatgttcagctcatcagagacaacaagctcatgcagcacaaaagactca
tcaggttttgagaatttatcagattacttgtttggtggagttgaacaggtttggaaccag
gatccatcttctcaaagagtttga
DBGET
integrated database retrieval system
