Brassica rapa (field mustard): 103874458
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Entry
103874458 CDS
T03449
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103874458
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103874458
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103874458
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103874458
Membrane trafficking [BR:
brp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
103874458
Ion channels [BR:
brp04040
]
Chloride channels
Chloride channel (CLC)
103874458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
103874458
NCBI-ProteinID:
XP_009151132
UniProt:
M4D093
LinkDB
All DBs
Position
A06:22740779..22746305
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AA seq
792 aa
AA seq
DB search
MLSNHLQNGIESDNLLWSRVPDSDDTSTDGVGLLSSPRDGGGGVDSLDYEVIENYAYREE
QAHRGKLYVGYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAGWKFALTFAIIQKSYFAG
FIVYLVINLVLVFSSAYIITQFAPAAAGSGIPEIKGYLNGIDIPGTLLFRTLIGKIFGSI
GSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHFNSRWPQLFKSDRDRRDLVTCGCAA
GVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGICGHFGG
GGFIIWDVSDGQDDYYFKELLPMAVIGVIGGLLGALFNQLTYYMTSWRRNYLHKKGNRVK
IYEACIISCLTSAISFGLPLLRKCSPCPETVPDSGIECPRPPGMYGNYVNFYCKTDNEYN
DLATIFFNTQDDAIRNLFSAKTMREFSAQSLLTFLAMFYTLAVVTFGTAVPAGQFVPGIM
IGSTYGRLVGMFVVRFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLL
PLIMLVLLVSKAVGDAFNEGLYEVQARLKGIPLLESRPKYHMRQMIAKEACQSQKVISLP
RVIRVADVASILRSNKHNGFPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCD
PSARPIMHRFSEFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKV
YNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENGESSAVELQQSTSVRGRYSETATRT
DAGRPLLDDLLG
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgaatcatctacagaacgggatcgaatccgataatctcctctggtctcgcgtc
cctgactccgacgatacttccaccgacggcgttggcttactcagctccccccgtgacggc
ggtggtggcgttgatagtctcgactacgaggttatcgagaattacgcttacagagaagaa
caggcgcatagagggaagctttacgttggttactacgttgctgtcaagtggttcttctcg
ttactcatcgggatcggaactggattggctgctgttttcattaatctctcggttgagaat
ttcgctggatggaagtttgctctcactttcgccatcattcagaagtcttattttgcgggg
tttattgtttaccttgtcatcaatctagtcttggtgttttcttccgcgtatattattact
cagttcgctcctgctgccgctggctctggcattcctgagatcaagggttatctcaacgga
attgatattcctggtaccttgctctttagaacccttatcggaaagatatttggaagcatt
ggttctgttggaggtggtttagccttggggaaagaaggcccacttgtacatacaggtgct
tgcattgcatctttgcttggtcagggtggatctaccaaataccattttaactctagatgg
ccgcagctttttaagagtgacagagatcgtcgtgatcttgtcacttgtggatgtgcagct
ggagttgctgctgcttttagagctccagttggtggagtgttatttgcgttagaggaggtc
acatcatggtggagaagtcaacttatgtggcgtgtctttttcacatctgctatcgtggct
gttgtggtgcgtactgccatgggatggtgcaagagtggaatatgtggacattttggtgga
ggtggtttcattatatgggatgtatcagatggtcaagatgactactacttcaaggagcta
ctaccaatggctgtaattggagttatcggaggcctacttggggcattatttaaccaactt
acatactatatgacatcttggcgtcgaaattatttgcacaagaaaggaaatcgagtgaag
atatatgaagcatgcatcatctcttgcttaacttcagcaatctcatttgggctgccactc
ctaaggaaatgcagtccatgccctgaaacagtgcctgactctggtattgaatgtccacgg
cctccaggaatgtatgggaattacgttaatttctactgcaagacggataatgaatacaat
gatctcgccacaattttcttcaatactcaggatgatgctataaggaatttgttcagcgca
aaaacaatgcgagaattcagtgctcagagtctactgacttttttggctatgttttatacg
ttagcagtggtgacatttggcacagctgttcccgctggccagtttgtccctggaataatg
ataggatcaacttatgggcgccttgtaggcatgtttgtagtcaggttttacaagaagctc
aacattgaagagggaacttatgctttgctgggagctgcttcatttcttggaggctcgatg
cggatgactgtatctttatgtgttatcatggttgaaatcacaaacaacctgaaacttctg
cctcttataatgttggttcttctcgtttcaaaggccgtgggtgatgctttcaatgaggga
ttgtatgaagtacaagcacgccttaagggcattccgttactggaatcgagacccaaatat
cacatgcggcaaatgatagcgaaggaagcatgtcaaagtcagaaggtaatttctttacct
cgagttatcagagttgcagatgtcgcttcaattttgcgcagcaacaaacacaatggattt
ccggtgatcgaccacacgagaagtggtgaaacacttgtcattgggttagttcttcggagt
cacttgcttgtactccttcaatctaaagtggattttcaacatagtcctctgccttgtgat
ccaagcgccagaccgatcatgcacagatttagcgagtttgctaaacctgtttcatctaaa
gggttatgcatagaggatatacatctaacttcagatgatttagagatgtatatagatctt
gctccatttctgaatccgtctccatacgttgttcctgaagacatgtcgttgacaaaggta
tacaacctttttcggcaacttggattgagacatctatttgttgttcctcgtccttctcgt
gtgataggcttgatcacaagaaaggatttgctaattgaggaaaacggggaatcatcagct
gttgaactccaacagtcaactagtgtaagaggtcggtacagtgagacagcaacgcggacg
gacgctggacgtccgcttctagacgatctcttaggctag
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