KEGG   Brassica rapa (field mustard): 103874470
Entry
103874470         CDS       T03449                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03030  DNA replication
brp03410  Base excision repair
brp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103874470
   03410 Base excision repair
    103874470
   03450 Non-homologous end-joining
    103874470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brp03032]
    103874470
   03400 DNA repair and recombination proteins [BR:brp03400]
    103874470
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103874470
DNA replication proteins [BR:brp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    103874470
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     103874470
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     103874470
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103874470
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N DUF3231 HHH_5
Other DBs
NCBI-GeneID: 103874470
NCBI-ProteinID: XP_009151146
LinkDB
Position
A06:complement(22810284..22814162)
AA seq 417 aa
MGIKGLTKLLADNAPSAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE
VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLSGAIEAGN
KEDIEKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKAGKVYGVASED
MDSLTFGAPKFLRHLMDPSSRKIPVMEFDVAKILEELQLTMDQFIDLCILSGCDYCDSIR
GIGGQTALKLIRQHGSIETILENINKERYQIPEEWPYNEARKLFKEPDVLTDEEQLDIKW
TSPDEEGIVQFLVNENGFNIDRVTKAVEKIKSAKNKSSQGRLESFFKPVASSSVPAKRKG
TKCLLRQYKPAISNKMSSVHAFGCNTSNNIVSLRLFPLIPGSNLSVQMAGAGICTRF
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgggtatcaagggattaacgaagcttttggcggacaatgcgcctagcgccatgaaagag
cagaaattcgagagctacttcggtcggaaaatagcagttgatgcaagcatgagcatttac
cagttccttattgtggtggggaggactgggactgagatgctcaccaatgaagctggtgaa
gtcactagccatttgcaagggatgtttaatcgaaccattcgtcttctcgaagctggaatt
aagcctgtgtatgtttttgatggaaagcctccggagttaaagagacaagagctagccaaa
cgttactccaagagagccgatgcaactgcagatttgagtggtgcaattgaggcagggaac
aaggaggacattgagaagtacagcaaacgaactgtgaaggtgacaaagcaacacaatgac
gactgcaaaagactcttgaaactcatgggggtgcccgttgttgaggccacttccgaagca
gaagcgcaatgtgctgcactttgcaaagcaggaaaggtgtatggtgtggcttctgaagat
atggactccttgacttttggagctcctaagtttcttcgccacctgatggatcctagctcc
agaaagatccctgtcatggaatttgacgttgccaagattttagaagagcttcaacttacc
atggatcagttcatcgacttgtgcatattgtcaggatgtgactattgtgatagcatccgt
ggtatcggagggcagactgccttaaagctcattcgccagcatggctctattgagactata
ctcgaaaatataaacaaagaaaggtatcagatacccgaggaatggccatataatgaagct
cgtaaactttttaaagaacctgatgtcttaactgatgaagagcagctcgatatcaagtgg
acctctccagatgaagagggtatagttcagtttttggtgaatgaaaatggattcaacata
gatagggtaaccaaggcggtagagaaaatcaaatctgccaagaacaagtcatcccaggga
aggttggagtcatttttcaagccagtcgctagctcatccgtgcctgctaaaagaaagggt
accaaatgcttactccggcagtataaaccagctatcagcaataaaatgtcctctgtgcat
gcttttggatgtaacacctccaataacattgttagccttaggctgttccctctaatcccg
ggttccaacctctctgttcaaatggctggagctggcatatgcacaagattctaa

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