Brassica rapa (field mustard): 103874499
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Entry
103874499 CDS
T03449
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103874499
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103874499
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
103874499
NCBI-ProteinID:
XP_009151172
UniProt:
M4D0D3
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Position
A06:22977588..22980610
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AA seq
640 aa
AA seq
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MSHSILSALSEDLLVRVYGFLDPPCRKTWRLVSREFHRVDSLSRTSIRILRVEFLPALLF
KHPNLSSLDLSVCPKLDDDVVLRIALDGAVSTSRLKSLNLSRATAVRARGLETLARLCRA
LERVDVSHCWAFGDREAAALSVAAGLRELKMDKCLSLSDVGLARIVVGCSKLNKISLKWC
MEISDLGIDLLCKKCKDLKSLDVSYLKITNESVRSIALLPKLEVLEMVSCPLIDDAGLQY
LENGSPSLKEIDVTRCDRVSSSSLISIVKGHPDLQHLKASHCISEISLSFLHNIKALKHL
KTLWIDGARVSDSSLLTLSASCRALTELGVSRCVGVTDIGMMGLARNCSNLKALNLACCG
FVTDAAISAVAQSCLNLESLQLESCHLITEKGLQSLGCYSKRLQELDLTDCDGVNDRGLE
YISKCSNLLRLKLGLCANISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAAISRGCKSL
NRLILSYCGELTDTGAEKIRQLEQLTHLELRGIKNITGTGLAAIARGCKKLAYLDLKQCE
NIDDSGFWALAYFSRNLRQINLCNCSVSDTALCMLMSNLSRVQDVDLVHLNRVTVEGFEF
ALRACCNRLKKLKLLAPLRFLLSSELLEVLHARGCRIRWD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattccattttatccgctttgtcggaagatctcctggttcgcgtctacgggttt
ctagacccgccgtgtcggaaaacatggcgtctcgtcagcagagagttccaccgagtcgac
tcgctgagccgaacctcgatccgaatcctccgcgtcgagttcctccccgcgcttctcttc
aagcaccccaacctctcctcgctcgacctctccgtgtgccccaaactcgacgacgacgtc
gttttgcgcatagccctcgacggcgccgtttcgacgtcgcgtctcaagtcgctcaacctc
agccgcgccaccgcggttcgagccaggggactggagacgctggctcgtctgtgccgcgct
ctggagcgagtcgacgtgtctcactgctgggctttcggcgacagggaggcggcggcgctt
tccgtcgcggcggggctcagggagctgaagatggacaaatgcttgagcctaagcgacgtc
ggattggcgaggatcgtcgtcgggtgcagtaagcttaacaagattagtttgaagtggtgt
atggagatctctgatcttgggattgatcttctctgtaagaaatgtaaagacttgaagtct
ctcgatgtttcgtatctcaagatcacgaatgagtcagtccgctctatagctttactacca
aagctcgaggttttagaaatggtaagctgcccgttgatagatgatgctgggttacagtat
ctcgagaatggctctccttcactaaaggagattgatgtcacaaggtgtgatcgtgtgagt
tcgtccagcttaatctccatagtcaaaggccatcctgatcttcaacaccttaaagccagt
cactgtatatccgaaatatctctgagcttcttacacaacatcaaagctttaaagcatctc
aagactctatggatcgatggagctcgtgtctctgattcctctctgttaaccttaagcgct
agctgtagagccttaacagaactcggagtgagcagatgtgtaggtgtgactgacattggg
atgatgggactcgcacgcaactgctccaacctcaaagctcttaacctggcgtgctgcggg
ttcgtgacggatgcagccatctctgctgtagctcaatcttgtctgaacctggagagttta
cagttagagtcttgccatttgataacagagaaaggtcttcaatcgcttggatgttactcc
aagcgtcttcaagaactcgatcttactgactgtgatggcgttaatgatagagggcttgag
tatatctcaaaatgttcgaatcttctaagattgaaacttggactctgcgcaaatatctca
gacaaagggatctttcatatcggctccaaatgctcgaagcttctagaacttgatctatac
cgatgtgctggttttggagatgatggtttagcagctatatcaagaggttgcaagagcttg
aaccggctcattctatcgtactgcggtgaactaacagacacaggggctgagaaaatccgc
cagctagaacaactgactcaccttgaacttcgagggataaagaatataacgggtactggt
ctagctgcaattgcgcgcggctgcaagaaactggcttacttggacctcaagcaatgtgag
aatatcgatgactcaggcttctgggcgcttgcgtacttctcaagaaacctaagacagata
aacttgtgcaattgctctgtctctgatacggctctatgcatgttgatgagcaatctgagt
cgggttcaagacgttgacttagtccacttgaaccgtgtgactgtggaagggtttgagttt
gctctaagagcatgttgcaacaggctcaagaagcttaaacttctcgcacctctcagattc
ttgctctcatctgaattgctcgaggtgcttcatgctcgtggttgccgaattagatgggac
tga
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