Brassica rapa (field mustard): 103874554
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Entry
103874554 CDS
T03449
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103874554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103874554
03036 Chromosome and associated proteins [BR:
brp03036
]
103874554
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
103874554
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
103874554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
UPF0154
Glyco_hydro_3
Motif
Other DBs
NCBI-GeneID:
103874554
NCBI-ProteinID:
XP_009151223
UniProt:
M4D0H8
LinkDB
All DBs
Position
A06:complement(23259160..23275108)
Genome browser
AA seq
1204 aa
AA seq
DB search
MDASNNSTASNVAQAILAVLDYNSTPDARRAAVAFLESVKSGDIRVLAHVSLLLVKKECS
SEIRLHAFKMLQHLVRLRWEELSPSERRDFAKVSVDLMSEIASPSEEWSLKSQSAALVAE
IVRREGPDLWQELFPSLTSLSAQGPLQAEVVSMMLRWLPEDITVHNEDLEGDRRRLLLRG
LTQSLPEILPLLYNLLERHFGAAMNEASRQQVDLAKQHGAVVIASLNAINAYAEWAPVLD
LSRYGIINGCGALLSSPDFRLHACDFFKLVCSRKRPSDVSGTEFDAAISSLFQSLMNVSR
EFLYRSASCTSGIDESDYEFAECICESLVSLGSTNLQCIATDGGVLALYLQQMLGFFQHF
KLGLHFEAMIFWLALLRDLLTKPKAAANPGAEGVAVGGMQSSSQVDNEKKKILGLISDDV
ASTILDVSFQRMLKKEKVPPRIAPSLGPLELWSDEFEGKGDFGQYRSRLLDVVKFIASHK
PLVASTKISERIITLIKDLLASPVPLQDVAVLDSQQLAFDCIVATVFDGFSEFAGGSSDV
HFSLRGIFEGLLQQLLSLKLTEPELIKMHGHYLDAMGPFLKYFPDAVGNVISKLFEMLTS
LPHIVKDPATSTSRIARLQICTSFIRIAKTADKSVLPHMKSIADTMAYMQREGTLLRGEH
NILGEAFLVMASAAGAQQQQEVLAWLLEPLSQQWIQSEWQNCYLSDPMGLVRLCSNTPFM
WSLFHTVTFFEKALKRSGHRKSNLNTTSVTSQDLHPMAHHLSWMLPPLLKLLRVIHSLWS
PSVYQTLPPEMRAAMTMADVERYSLLGEAIPKFSKASSVYADGSFDGGKEGQSEANESDV
RNWLKGIRDSGYCVLGLSATIGDTFFKCLDANYVAVALMENLQSMEFRHMRQLIHSFVVY
VVKSCPADMWETWLEVLLHPLFIHCQKAISSSWASLMREGRAQVPDSFGVQNGPDMKLEV
MEEKLLRDLTREIANLLSTMASPGLNPGLPVLEHSGPVGRIDVSSPKDLLAFKSNSMVGF
LLNHKNVALPALQICLEVFTWTDGETTTKVCCFCGVVVLLAILTNNVELREFVSKDLFSA
VIRGLAMESNAVNSADLVNLCREIVIYLSDRDPAPRQVLLSLPCLTPNDLRAFEEAMGKT
PSPKEQKQLMRSLLLLGTGNNLRALAAQKTMNVITNVTLRTRGPASTSEAKEDEGETIGL
ASVL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggatgctagcaacaacagcacagctagcaacgtggctcaagcgattctcgccgtcctc
gattataactccactcccgatgctcgcagagccgccgttgcattcctcgaatctgttaaa
tctggagatatcagggttctagcacacgtttccttacttctagtgaagaaggaatgctct
tcagagatccgtctgcatgccttcaaaatgttacagcatctggttagactacggtgggaa
gaattaagcccctcagagcgcagggattttgctaaggtctctgttgacttaatgtcagag
atagctagtccatctgaggaatggtctctgaagagtcagtcagctgcccttgtagctgag
atagttagaagagaaggtcccgatctttggcaggagttgtttccttcactaacctccttg
tctgcacagggcccattacaagctgaagtggtctcgatgatgctcagatggcttcctgaa
gatattacagttcacaatgaggacttggaaggtgacaggcgtcggctactgttgcgggga
cttactcaatctttgcctgagattttacctttgttgtataatcttctcgagagacacttt
ggagctgcaatgaatgaagctagtaggcaacaagttgacttagcaaaacagcatggggct
gtggtcatagctagtttgaatgccatcaatgcatatgccgaatgggctcctgttttagat
ctttctagatatggaatcattaacgggtgcggtgcacttctttcctctcctgacttccgt
cttcatgcttgtgattttttcaaacttgtctgctcaagaaaaagacccagtgatgtttct
ggtactgaattcgatgctgcgattagcagtctgtttcagagtctgatgaatgtctccaga
gagttcttatacagatcagcttcatgtacttcgggtatcgatgaaagtgattatgaattt
gctgagtgtatatgtgaaagcttggtttctttaggctcaacaaacctgcaatgtattgcg
actgatggtggtgtactggctctctaccttcaacagatgcttggtttctttcaacacttt
aagttgggtcttcactttgaagcaatgatcttctggctggcattactgagggatctactt
acaaagccaaaggctgctgccaatccaggcgcagagggagtagcagttggtggcatgcaa
agttcaagccaagttgataacgaaaagaaaaagattttaggtcttattagtgatgacgtt
gctagcacaattcttgatgtatctttccagcggatgctcaagaaagaaaaagtccctcct
cgaattgctccttctcttgggcctttagaactgtggagtgatgagttcgaaggaaaggga
gactttggccaataccgatcaaggcttttagacgtggtcaagtttatcgcttctcacaag
cccctcgttgccagtactaaaatatctgaaaggattatcaccctcatcaaagatctattg
gcttctccagtgcctcttcaggatgtggcagtgttggacagccagcaattggcttttgat
tgtattgtagcaacggtttttgatggattcagtgagtttgccggtggtagttctgatgtt
catttttcattgcgtggaatatttgagggcttgcttcagcagcttctctcattgaaattg
actgagccggaacttataaaaatgcacgggcattatctggatgcaatgggtccctttctc
aagtatttccccgatgcagttggaaatgtgatcagcaaattgtttgaaatgcttacctct
cttccacacattgtcaaggatccagcaactagtacttcaagaatcgcaagattgcagatt
tgcacgtcttttatacgtatagctaaaaccgctgataaaagtgttctgcctcacatgaag
tcgattgctgatacaatggcatatatgcaaagagagggaacgttactccgtggagagcat
aacattctgggtgaagcatttcttgttatggcttctgcagcaggagcacaacagcagcaa
gaagttcttgcttggttgctggagccattgagccaacagtggatccaatcagagtggcag
aattgctatctatcggaccctatgggtctggttcgtttgtgctccaacacccccttcatg
tggtccttgttccacaccgttacattctttgagaaggcactcaagagaagtggacataga
aaaagcaacttgaatacgacctcagtaacaagtcaagatttgcatcctatggctcatcat
ctttcttggatgttgccacctctcctaaaacttctccgtgttatccattccctttggtct
ccctcagtatatcaaacactacccccagagatgagggcagctatgacaatggctgatgtt
gagcgatacagtctccttggggaagcaattcctaaattttcaaaagcctcgtcggtttat
gctgatggatcttttgatggtggtaaagaaggacaatctgaggcaaacgaatctgatgtg
cgaaattggttgaaagggattcgagatagtggatactgtgtgttgggtctatcagcaaca
atcggagatacattcttcaaatgcctagatgccaactatgtcgcagtagcactcatggag
aacttacagtcaatggagttcaggcacatgcgacagcttattcattcctttgtagtttat
gtagtaaaatcttgtccggcagatatgtgggagacgtggcttgaagttctcttgcaccca
ctatttattcattgtcagaaagctatcagctcctcttgggccagtcttatgcgtgagggc
agagcacaagttccagattcgtttggtgtacaaaatgggccggacatgaaacttgaagta
atggaagagaaactgctgagggatctaactagggagattgccaacctcctttcaacaatg
gcttctcctggtttaaaccccgggcttcctgttctggagcattcaggccctgtgggacgt
attgacgtgtcttctcccaaggatttacttgcattcaaatccaactctatggttggcttc
ctcctgaatcacaaaaacgtggctctcccagctctgcaaatctgtttggaagtctttaca
tggacagatggggaaacaacaaccaaagtctgttgcttctgtggtgtggttgttctacta
gcgatcctgacaaataacgttgagctcagagaatttgtgtcaaaagatttgttttctgcg
gtcattagaggcttggccatggagtcaaatgccgttaacagtgctgatctagttaaccta
tgccgtgaaatagttatttatctctctgacagagacccagcccctcgccaggttttactt
tcacttccttgtcttacacccaacgacttgcgtgctttcgaagaagctatggggaaaact
ccaagtcccaaagagcagaagcaactcatgaggagcttgttgctgttaggtacagggaac
aacttaagagcacttgctgctcagaagaccatgaatgtcatcaccaacgtcactttaagg
actcgcggaccagcaagtacttctgaagctaaagaagacgaaggggaaacaatcgggctg
gcgagtgttttgtga
DBGET
integrated database retrieval system
