Brassica rapa (field mustard): 103874635
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Entry
103874635 CDS
T03449
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD1 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103874635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103874635
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103874635
Membrane trafficking [BR:
brp04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
103874635
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
103874635
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103874635
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank
BAR
Ank_3
Ank_2
Ank_5
Ank_4
PH_8
PH_11
DUF6444
BAR_2
PH_20
PH_13
ANK_LRRK2
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
103874635
NCBI-ProteinID:
XP_033128991
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Position
A06:17768809..17776403
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AA seq
847 aa
AA seq
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MQHFAKLDDSPMFRQQMQCMEESAESLRMRCLRFYKGCRKYTEGLGEGYDADIGFVNALE
SFGGGPDDPLCVAFGGTHPPFLFPSLSLISNLKTLHFTSPLGPVMTKFTIALREIGTYKD
ALRSQVEHMLNDRLHQFVNVDVQEVKEARKRFDKASIVYDQAREKLLSLRKSTRLDVAAT
IEEDLHSARTAFEQSRFLLVSALSHAEAKKRFEFLEAVSRTMDAHLRFFKQGYELLHQME
PFINQVLTYAHQSRECANYETASLNERMQEYKRQVDRETRNSNGSPTGDGMRHNSRNSQK
VIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFILDSRGMLYYYRKQWNWSSGNG
SRSAAQKNTTSENSPGLLSRWLSSHYHGDEKPVARHTVNLLTSTIKVDADQTDLKFCFRI
ISPTKVYTLQAENAQDQMDWIEKITGVIASLLSFQTPERAINRLSTVDGDTFSVSDSGSV
ADPHDVEQAESGESTVENNHMTGGKRSRFSGCLQQHDMMAKPIDVLTKVLGNEKCADCGA
PEPDWASLNLGVLICIECSGIHRNLGVHISKVRSLTLDVKVWEPSVLTLFQSLGNVYVNS
VWEELLNSESRSSGTPKSDQPRKFLARKPGFSDPISMKELFIHAKYSERIFVRKAIDSQH
FQAVFQEIWENVRANDKKSVYKHIVCYQADVNALRGQASYTVSLPLSKMMELEVKEETLA
AKFKRIEEEFQENPEGYSDSTGDGESMVREEASKDCSLLHLACIYADIGMVELLLQYGAK
INATDSKGRTPLHHCIISRRYAIARLLLMRGGDPNAEDKDSYTPVKYALETDLNDSELIA
LLTDSRR
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatttcgctaagctcgatgattcgcccatgtttcggcaacagatgcaatgcatg
gaagagagtgcggagtcgctacgaatgcgatgcttaaggttctacaaaggatgcagaaaa
tacacggagggacttggagaagggtatgatgcagacattggctttgtaaatgctcttgaa
tctttcggtggtggccctgatgatcccctctgcgttgcttttggcggtacccaccctccc
tttctctttccctcactgtctcttattagtaatctaaaaactctgcattttacttctcct
ttaggtcctgtaatgacaaagttcactattgctctacgagaaattgggacatacaaggat
gctcttcgttcccaggtagaacatatgctgaatgacagattgcatcagtttgtcaatgtt
gatgtccaagaagttaaggaagcacgtaaacggtttgacaaagcttccatcgtctacgac
caggcacgagagaaacttctttcattaagaaagagtacaagattggatgtggctgccacc
atcgaggaggacttacatagcgcaagaacagcattcgagcaatcccggtttcttctggtt
agtgcactctctcatgcggaagctaaaaagaggtttgagttcttggaagcagtcagccgg
acaatggatgctcatctccgtttcttcaaacagggatatgagctactgcatcaaatggag
ccttttattaatcaggtgttgacttatgcacaccagtctagagaatgtgcaaactatgaa
acggcatcacttaatgaaaggatgcaagaatacaaaaggcaagttgatcgagaaactaga
aactcaaatggttctccaacaggggatggcatgagacacaactcaagaaactctcaaaaa
gtcattgaggccgtcatgcaatctgctgcaaaaggaaaggttcagactataagacaaggg
tatctgtctaaacgttcctcaaacttgagaggtgactggaaaagaaggttctttattctt
gatagccgtggcatgctatactattaccgcaagcagtggaattggtcttcaggaaatgga
agcaggtctgctgctcagaagaatacgacttcagaaaacagtcctggtctgctaagtcgg
tggttgtcttctcattatcacggtgatgaaaaaccagtcgcacgtcacactgtgaacctg
cttacctcaactatcaaagttgatgcagatcagacggatctaaaattctgctttcgaatt
atttcacctacaaaagtttatacattgcaggcagagaatgcgcaagatcagatggactgg
atcgagaagataactggagttattgcttctttgctaagtttccagacacctgaaagagca
atcaatcgcctttctacagtggacggagataccttctctgtgagtgattccggttctgta
gcagatccacatgatgtggagcaggcagaaagtggagaatccacagtggaaaataatcac
atgactgggggaaaacgttcgaggttctcagggtgcttgcagcaacatgatatgatggca
aagccaattgatgtcttgaccaaagtattggggaatgagaaatgtgcagactgtggtgct
cctgaacctgattgggcctctttgaatctcggtgtcctcatatgtattgaatgttctggt
atacatcgtaaccttggtgtccacatttcaaaggtcagatcgctcacgcttgatgttaaa
gtatgggaaccatcggtcttgacgttgtttcagtcgttaggtaacgtatatgtaaactca
gtgtgggaggagttgttgaactcagagagtagatcttcgggcactcccaagtcagatcaa
ccaagaaagtttcttgcaaggaagcctggttttagtgaccccatatctatgaaagagttg
ttcatccacgcaaagtactcagagaggatatttgtccgcaaagcaatagacagtcagcat
ttccaggcagttttccaagagatttgggagaatgtgcgtgctaacgacaagaaatcagtt
tacaaacacattgtctgctaccaagcagatgtgaatgctctacgtggacaagcatcgtac
accgtgtctttacccttatcaaagatgatggagctggaggtaaaggaggaaacccttgca
gccaaattcaagagaatcgaagaggagtttcaagagaatccagagggctattctgactcg
acaggggatggggaaagtatggtcagagaagaagcttcaaaggactgctctttgcttcac
cttgcttgtatttatgcggatattggtatggtggaattattgcttcagtatggtgcaaaa
ataaatgcaactgattcaaaaggtcggactccacttcatcattgtatcatcagcaggaga
tatgcaattgcaaggttgctacttatgaggggaggagatccaaacgctgaggataaagac
agttacacaccggtcaaatatgctttagagacagacctcaatgacagcgaactaattgca
ttattaacagactccagaagatga
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