Brassica rapa (field mustard): 103874779
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Entry
103874779 CDS
T03449
Name
(RefSeq) SET and MYND domain-containing protein 4
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
brp04990
]
103874779
Domain-containing proteins not elsewhere classified [BR:
brp04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
103874779
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_14
TPR_10
TPR_16
SET
TPR_17
TPR_MalT
zf-MYND
Motif
Other DBs
NCBI-GeneID:
103874779
NCBI-ProteinID:
XP_009151465
UniProt:
A0A397ZD25
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Position
A05:16549156..16553875
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AA seq
786 aa
AA seq
DB search
METLKSLIPEHLLQTVKSSSSSVDDLLSSSSSLLRFLLGLPQFHQAVSELADPDLGCCGK
SQESSLDLKRRGNLCFRSRSFDDALRFYSKALRVARDNTLLASLFLNRANALHNLGLLQE
SLRDCHRALRIDPFYSKAWFRRGKLNTLLGNYKDAFRDITVSISLESSPAGKKQLQNELL
AIPDFQNKQTSENTLCYATADLPNVQSEVKLRCVSTKEKGRGMVSESDIEQPSVIHVEEP
FCVVISKSCRETHCHFCLNELPADSVPCPSCSVPVYCSESCQIQSGGTLSTNEMVKNSTF
QNLPDDIVEHIKGVTSAVRYYSETECVQEHQHECRGANWPAVLPSDAVLAGRVIMKLINQ
GETPTDLSNLQEKLDLSHSYSKMSPESKLELHLLSIVLIWCLNKSCCPDLSVCEASVSQT
IILLSQIKVNSMAIVRMKSSGDSFKCIPAGNVSAKEPIQSLEQIRVGQALYKIGSLFNHS
CKPNIHLYFLSRGLVMRTTEFVPVGCPLELSYGPEVGKWDCKDRIRFFEEEYFFHCQCCG
CSQMNISDLVINGYCCVNTSCTGVVLDSSVAACESEKLNHFLAAPKSLDHHFLVSEKVYA
GVSEVASSLLIKPSGSLHIKADKCLKCGSRCEVENSHAEVNKAWNHLRRVEELMNSGRAN
ISVLSDCLRSIAVLRTSLHMYNKDIADAEDKVAQACYLAGEMKGAREHCEASIKILKRLY
GDEHVVIGNELVKLASIQLASGDSSGAWETTKRLSQIFSKYYGSHAETLFSYLSCLKLEA
AKAVNL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttgaaatcgctaatacctgagcatcttctacaaacagtgaagagcagcagc
agcagcgtcgacgatctcctctcctcttcttcgtctctgctccgtttccttctgggtctt
ccccaatttcatcaagcggtgagtgagttagcggatcctgatctgggttgctgtgggaag
agccaagagtcttctctcgacttgaaacgtcgcggaaatctctgcttccgcagccggagc
ttcgacgatgctttacgcttctactctaaagccttacgtgttgctcgagacaacacctta
ctcgcttctctctttctcaatagagctaatgcccttcataatctggggcttcttcaagag
agcttgcgggactgccatcgtgctcttcgtattgatcctttttactcaaaggcttggttt
aggagaggcaaactcaatactcttcttggaaactataaagatgcgttccgggacatcaca
gtttctatctctctcgagtcatcacctgcggggaagaagcagctgcagaacgaacttctg
gctattccagactttcagaataagcaaacatcggagaacacactctgttatgctactgcg
gatctacccaacgtgcaaagcgaagtaaagctgcgttgtgtatccacaaaagagaaaggc
aggggcatggtatcagaatctgatattgaacaaccttctgtgatacatgtcgaagaacca
ttttgtgtggtcatatcaaaaagttgtcgggaaacacattgccacttttgccttaacgaa
ttgcctgctgactctgttccatgtccatcatgctcagtacctgtgtattgctcagagtcc
tgccagattcaatcaggtggaacgctttcaacaaatgagatggtcaagaattcgactttt
cagaacctacctgatgatattgtggagcatattaaaggcgttacatcagctgtaagatat
tattctgagactgagtgtgttcaagagcaccagcatgagtgtcggggagctaattggcct
gctgtactgccatctgatgctgttttagctggtcgagttataatgaagttgataaatcaa
ggggaaacacctacggatctttccaaccttcaggagaaattagatctttcccatagctat
tctaagatgagtccagagagcaagttagagttgcatctactttccatagtattgatttgg
tgccttaataaatcttgctgccctgatctttcagtctgcgaagcttctgtgtcacagact
attatactgctttcacaaatcaaggtgaactctatggcaattgtccggatgaaatccagc
ggcgattctttcaagtgcatcccagctgggaacgtttcagcaaaagagccgattcagagt
ttagagcagatcagagttggtcaggctctttataaaatcggtagcttgttcaatcattcc
tgcaagccgaacatccatttgtatttcctttcacgtggacttgttatgcgaacaacagag
tttgttcccgtgggttgccccctagaactgtcatatggtcctgaggtcggaaaatgggat
tgcaaagatcgtattagattttttgaagaggagtatttttttcattgtcagtgttgtggc
tgttctcaaatgaacatatcggaccttgttattaatggatattgctgtgtcaatacaagc
tgtactggcgtagtcttggatagtagtgtggctgcatgcgagtccgagaagctaaatcat
tttttggctgctccaaaaagtctagatcatcattttctggtgagtgaaaaggtgtatgct
ggtgtcagtgaagtagcttcaagtttgctcattaaacctagtggttctcttcatataaaa
gcagataaatgtttgaaatgtggatctcgctgtgaagtggaaaactctcatgcagaggtg
aacaaagcttggaatcacctgagaagggtggaagagttgatgaattcaggacgtgccaat
atttctgtattatcagattgtttaaggtccatcgctgtgctcagaacttcccttcacatg
tataacaaagacattgccgatgcggaggataaggttgctcaggcttgctatttagctgga
gaaatgaagggtgcaagggagcattgtgaagcgtccataaagattctgaagaggctgtat
ggggatgaacacgttgtgattggaaatgaactggtgaagcttgcgtcgattcagcttgca
tcaggtgattcgagtggagcctgggagactacaaagagattgtctcagatattctcgaag
tattacgggtcacatgctgaaactcttttctcttacctttcatgtcttaagctagaagct
gccaaagccgttaacttgtga
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