Brassica rapa (field mustard): 103874916
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Entry
103874916 CDS
T03449
Name
(RefSeq) flap endonuclease GEN-like 2 isoform X2
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103874916
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103874916
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_I_2
Chromo_2
Chromo_shadow
DUF8026
Motif
Other DBs
NCBI-GeneID:
103874916
NCBI-ProteinID:
XP_009151607
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All DBs
Position
A01:complement(13863270..13867935)
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AA seq
492 aa
AA seq
DB search
MIKEAKVIASTLGILCLDGVEEAEAQCALLNSENLCDACFSSDSDIFLFGAKTVYREICL
GEGGYVVCYEMEDIKKKLGLGRNSLIALALLLGSDYSQGVRGIRQEKACEIVRSVGENVI
LEKVSSEGLAFVKNKRNSKKQIRPKKGTLPLVAVNGSSHDPEGLQEIKEVIDAFMNPKCH
NADSNTVSRALAEFTFQRTKLQEICHQFFEWPSEKTDEYILPKIAERNLRRYAILQSRST
EVGVNRPLHKLQVPEKCPVSEIIKTRKVQGRECFEVSWNDLEGLETSIVPADLVERACPE
KIIEFKEKMEAKKKKKKKPKQKQPKSKEKETSSPSKASSLIELSLQLQQIDLSSTSDLAT
STIEEAEQEKEQQKSKKHDYLRLIDSPAKENSSIGWSTIGKFGVGSSSYSFYPETEVIDL
ISPCPEARSRNVSRSYQEQKSQEQKCLHHKLENVIELSDSETDDDDDDDGEHCRKARELR
MFLQNIRKDVIR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaggccaaagttattgcttccacactggggatactctgtttagacggggtt
gaggaagctgaagcacaatgtgctctgttaaactctgaaaacttatgtgacgcctgtttt
agctctgattcagatattttcctttttggggcaaagactgtgtaccgagagatatgcctt
ggtgaaggaggttacgttgtttgctatgagatggaagacatcaagaaaaagcttgggctt
ggacggaactcattgatagctctggcgcttctgcttggcagtgactactctcagggagtt
cgtggtattcgtcaggagaaagcctgcgagattgttaggtctgttggagaaaacgttatc
cttgaaaaagtttcatcagaaggactcgcttttgtcaaaaataagagaaattcaaagaag
caaattaggcctaaaaaggggaccttacccttggtggctgtaaatggaagtagtcatgat
ccagagggactgcaagagatcaaagaggtgatcgatgcgttcatgaatcccaagtgccac
aatgcagactctaatacagtttccagggctctggctgaattcactttccagcgcaccaag
ctacaggagatatgccaccagttctttgagtggccctctgagaaaacagatgaatacata
cttcctaaaattgctgaaagaaatctgagaaggtatgctattctgcaatcaagatcaact
gaggttggcgttaaccgtcctctccacaagctacaggtgccagagaagtgcccggtgtct
gaaatcattaagactcgcaaagtacagggacgagaatgttttgaagtctcatggaatgat
ctagaaggactagagacgtctattgttcctgcagatcttgtagaaagggcttgtcctgag
aagatcatagagttcaaggagaaaatggaagcaaagaagaagaagaagaagaagccgaaa
caaaaacaacctaaatcaaaagagaaggaaacaagttcaccgagtaaagcttcttcactt
atcgaactcagcctccaactccaacagattgatcttagttcaacatctgacctagctaca
agcaccatagaagaagcagagcaagagaaagaacagcaaaaatccaagaaacatgattac
ttgcgtctaatcgattcacctgctaaagaaaattccagtattggttggtcgaccattggt
aaattcggtgttggctcgagctcttattcattctatccagaaacagaagtcattgatctg
ataagcccttgtcctgaagctcggtcacggaacgtgtcaagaagttatcaagaacagaag
tctcaggagcagaagtgccttcatcacaaacttgagaatgtgattgagctgagtgattca
gagacagatgatgatgatgatgatgatggtgaacattgcagaaaagccagagagcttagg
atgttcttgcaaaatattaggaaagacgttatccgctga
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