Brassica rapa (field mustard): 103875134
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Entry
103875134 CDS
T03449
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103875134
03036 Chromosome and associated proteins [BR:
brp03036
]
103875134
Transcription factors [BR:
brp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
103875134
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
103875134
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
HMG_box_5
YL1
MlaC
Motif
Other DBs
NCBI-GeneID:
103875134
NCBI-ProteinID:
XP_009151852
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Position
A6
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AA seq
642 aa
AA seq
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MADGHSFNNISLSGRGGTNPGLLKINSGGIQWRKQGGGKAVEVDESDIVGLSWMKVPRTN
QLGVKTKDGLYYKFIGFRDQDVASLTSFFQSAFGKTPEEKQLSVSGRNWGEVDLNGNNLT
FLVGGKQAFEVSLADVSQTQLQGKNDVLLEFHVDDTAGANEKDSLTEISFHIPNSNTQFV
GDETRPPAQVLHDRIMAVADVGAGIEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDSVVESELSIS
DDLLNTKFKDKLEPSYKGLIHEVFTTVLRGLSGAKITKPGKFRSSQDGFAVKSSLKAEDG
VLYPLEKGFFFLPKPPTLILHDEIDNVEFERHVAGGANMHYFDLSIRLKTDHEHLFRNIQ
RNEYNNLYSFISSKGLKITNLGGAGTAEGVAAVLQEDDDAVDPHLERIRNQAADESDEED
EDFVGGEDDDGGSPTDDSGGDDDDSDASDDGEGEKEKSMTKEPKKETKSLPPKKKAVATE
EGSSKKRKVKRKKDPNAPKKAMSGFMYFSQMERDNIKKTHPGIGFGDVAKVLGDKWRQMS
AEEKEPYEAKAQVDKKRYEDQISDYKNPQPMLVDSENESDSN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggacattccttcaataacatctctctcagtggccgcggcggaacgaaccca
ggcctcctgaaaataaactcaggagggattcaatggaggaagcaaggcggtgggaaagct
gtggaagtcgatgagtctgatatcgttggcctcagctggatgaaggttccaaggacgaat
cagcttggtgtcaaaaccaaagatgggttgtactataagttcattggctttcgtgatcag
gatgttgcaagtctgacgagctttttccaaagtgcttttgggaaaacacctgaagagaaa
cagctctctgtcagtggtcgcaattggggagaggtggatttgaatgggaacaatctaacc
tttttggttggcggaaagcaagcttttgaagtgtccctggctgatgtttcacagactcag
cttcaagggaaaaatgatgtcttgttggagtttcatgttgatgatactgctggtgccaat
gagaaagactcgttgacggagataagttttcatattcccaattccaacactcagtttgtt
ggtgatgaaactcgtccgcctgctcaagttctccatgacagaatcatggctgtggctgat
gttggtgctggaattgaagaggcggtcgtcacatttgatggtatcgcaatcctcacaccc
aggggtcggtacagtgtggagcttcacctttccttcttacgattgcaaggacaagctaat
gacttcaaaatccaatacagtagtgttgtccgcttgtttttgcttccaaagtcgaaccag
ccacatacgtttgttgttatctctctagacccaccaatccggaaaggtcagacgatgtac
ccccatattgtgatgcagtttgagactgactccgtcgtcgaaagcgaactgtcaattagt
gatgatcttttgaatacaaagttcaaggacaagttggagccatcatataagggtctcatt
catgaagtcttcaccacagtgttgcgtgggctgtctggtgcaaagatcaccaaaccaggg
aaattccgcagttcccaagatgggtttgcagtgaaatcatctcttaaggccgaagatggt
gttctttatccacttgagaagggctttttctttttacctaaacctccaacgcttatactt
catgatgagattgacaatgtggagttcgaaaggcatgttgctggtggtgctaacatgcat
tacttcgatctttccataagactgaaaactgatcatgaacatctgttccggaatattcag
aggaatgagtataataatctctactccttcataagctctaagggtttgaagattacaaac
cttggaggtgcgggtaccgcagagggtgttgctgccgttcttcaggaggatgatgatgct
gttgaccctcatcttgagcgtatcagaaaccaagctgctgatgagagtgacgaggaggac
gaagactttgttgggggtgaggatgacgacggtggttcaccaactgatgattctggcgga
gacgacgacgactctgatgctagtgatgatggcgaaggagagaaagagaaatctatgacg
aaggaaccaaagaaagagacgaaaagcttgcccccgaagaagaaagcagtagccacagag
gaaggcagtagcaagaagaggaaggtgaaaaggaagaaggatcctaatgcacctaagaag
gcgatgtctggtttcatgtacttctcccaaatggaaagagataacataaagaagactcac
ccaggaataggatttggagatgtggcgaaggtgcttggagataagtggcgtcagatgtct
gccgaggaaaaagagccgtatgaagctaaggcacaagtcgacaagaagcgatacgaggat
cagattagtgattacaagaaccctcagccaatgcttgttgactcggaaaacgagtccgac
agtaactaa
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