Brassica rapa (field mustard): 103875229
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Entry
103875229 CDS
T03449
Name
(RefSeq) uncharacterized protein LOC103875229
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
103875229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103875229
Membrane trafficking [BR:
brp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
103875229
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PGAP1
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Palm_thioest
TRP
DUF676
PGAP1_3rd
Ser_hydrolase
Motif
Other DBs
NCBI-GeneID:
103875229
NCBI-ProteinID:
XP_009151973
UniProt:
M4E910
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All DBs
Position
A06:complement(25156112..25163733)
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AA seq
1094 aa
AA seq
DB search
MRGVRSVMSSQGVRPRLRIVGVVILAAWIGLAALFGLLKPIKNGCTMTYMYPTYIPISVT
DGATPPGRYGLYLYHEGWRKIDFKEHISKLSGVPVLFIPGNAGSYKQVRSVAAESDRAYQ
GGPFERTFYQEASLFRGEGEDTESVEYDLSSQYSNRLDWFAVDLEGEHSAMDGRILEEHT
EYVVYAIHRILDQYKESHDTREREGAAASSNLPRNVILVGHSMGGFVARAAAVHPRLRKS
AVQTILTLSSPHQSPPLALQPSLGHYFARVNQEWKKGYEVQTSPGGSYVSDPLLSGVVVV
SIAGGYNDYQVRSKLESLDGIVPASHGFMISSTSMKNVWLSMEHQAILWCNQLVVQVSHT
LLSLVDSKTGQPFSDTQKRLWILTRMLQSALAQSFNGVTPMKISNELPMLASKGSESQTS
SCPMDWRDDALDRDLYIQTSTVTILAMDGRRRWLDIELLGSNGKNHFIFVTNLAPCSGVR
LHLWPEKEKSNSNLPVCERVLEVTSKMVLIPAGPAPKQSEPGSQTEQAPPSAVLKLEPED
MHGFRFLTISVAPREAVSGRPPVAVSMAVGQFFNPNEGAMEVSSQSMLLSTYWAKEIFLK
EDHPLAYNLSFAISLGLLPITLSLKTTGCGIKTSGLPDGETGDLDKDKLCKLRCFPPVAL
AWDSASGLHVFPNLYSEIITIDSSPALWSSQSPEKTTVMLLVDPHCSYTASVHVSAPAMS
SRFVLLYGPQIVGFSFAVILYALMRQANQWDQNLSVPPLLSAVEYNLEMPSPFLILAAIP
LLSSLFFSFVMAQPIPPLTSFTMVSLICYLLANAFISVLIIVSKFVLQALALVHTTVKYR
CQALERNYSFAFLRWFSILASSFVCLKAIRILKLNTTIVMTLAAVTLVTFVHPALGLFVL
LASHALCCHNSMCCIMMASKRKESVDQKNEAERKTRHPSSRQESLSVDLSEKSFVETQAD
IFNHRHGLLILHLLAALMFVPSLAAWFQRIGTGQSFPWFADSALCVGVIFHGVLNSRPES
SILRSFPSLLGHKLGPHHMYFLAGYCCFFSGLDLAPYKVFYAIAALGYISLTLKISQVNK
NDLRFRTKSRIHRN
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtgtaagatctgttatgagcagtcaaggcgttcgaccaaggctgaggatagtt
ggcgttgttattttagctgcatggattgggcttgccgctttgtttggtctgctaaaacct
ataaagaatggttgcactatgacttacatgtatcctacttacattcctatctctgtgacc
gacggtgcaactcctcctgggagatatgggctctatctttaccatgaagggtggaggaag
attgattttaaggaacacatcagtaaacttagcggagttccggttcttttcattccgggc
aacgccggtagctacaagcaggtcaggtctgtggcagcagaatctgatagagcataccag
ggaggcccatttgagcgcacattctaccaggaagcttctctattccgtggggaaggagaa
gatacagagtctgtagaatatgatttgtctagtcagtacagcaacagactagactggttt
gcggtggatcttgaaggtgaacattctgcaatggatggtcgcatacttgaggagcacact
gaatatgtcgtatatgccattcacaggatcttagatcaatataaggaatctcatgatacc
agagaaagagaaggtgctgccgcctccagtaacttacctcgtaatgtaatattggttggc
cactctatgggtggttttgttgccagagctgctgcagtccatcctcgtttgaggaaatca
gctgtgcaaaccattctaacactctcaagtccgcaccaatcacctcctctggcattgcag
ccatccttggggcattactttgctcgagtgaaccaagaatggaaaaaaggttatgaagta
caaacatcccctggaggaagttacgtatctgacccattactttctggagttgttgttgta
tccattgctggtggctacaatgattatcaggtgcgatcaaagttagagtcacttgatggc
attgtccctgcaagtcacggctttatgataagtagtacaagtatgaaaaatgtgtggctg
tcaatggaacatcaagctattctgtggtgtaatcaactggttgttcaagtttcacatacg
cttcttagtttggttgactcaaaaactggtcagccattttccgatactcagaagaggctt
tggatattgaccagaatgcttcaaagtgcattagcacaaagcttcaatggagtgacgcct
atgaaaatttctaatgagttgcccatgttagcctcaaagggctctgaatcacaaacttcg
tcatgtcccatggattggagggatgatgctctcgatagggatctttacatacaaacaagt
actgttacaattttggcaatggacgggagaaggcgttggttggacatagaattgttggga
tcaaatggaaagaaccactttatctttgttacaaatctggcgccttgttctggagtaaga
ctccatctatggcctgagaaggagaaatcaaattcaaatttacctgtttgtgaaagggtt
ctcgaagttacgtcaaagatggttctcattccagcaggccctgcaccaaaacagtcggag
ccagggagtcaaaccgagcaagctcccccatctgcagtgctgaagctagagcctgaagac
atgcacggattcagattcttgactatctcagttgcgcctcgcgaagcagtatccggtaga
cctcctgtggcggtttctatggcagtggggcagttctttaaccctaatgaaggggccatg
gaggtctcatctcaatcaatgctcttatccacttactgggcaaaggaaatatttctgaag
gaggaccatcctttagcttacaatctatcgtttgctatcagcttaggtctattgcctata
acactgtcactgaaaactactggatgtggaattaaaacttctggtctaccagatggcgag
acaggagacttggacaaggataagctttgcaaattgcgttgcttcccacctgttgccctt
gcctgggattctgcttctggacttcatgtgtttccaaatctctacagtgagataataact
attgattcttcaccagctctttggagttctcagagtcctgagaaaactactgttatgcta
ctggttgaccctcattgctcatatactgcaagcgttcatgtctctgctcctgccatgtcc
agcagatttgtacttctatatggtcctcagatagttggcttctcgtttgccgttatattg
tatgctctcatgcggcaagctaatcagtgggaccagaatttatctgtgccaccattgctc
tctgctgtagagtacaacttggaaatgccatccccatttctgattctagctgcaatccct
cttttgagttcgttgttcttctccttcgtaatggctcaaccaattcctcccctcacaagc
ttcacaatggtctcgttgatttgttatttgttggccaatgccttcatcagtgtgttaatt
attgtctccaaatttgtcttacaagcgttggccctcgtccacaccactgttaaatatagg
tgccaagctttggaaagaaactattcttttgcttttcttcgttggttctctatacttgct
tccagtttcgtctgtttaaaggcaatccgcattctaaagctcaacaccacaatcgtaatg
acactagccgcggttaccttggtgacctttgttcatccggcgttgggtctttttgtactc
ctcgcctctcatgccctttgctgccataactcaatgtgctgtattatgatggcatcgaag
agaaaggagtcagtcgatcagaaaaatgaagctgagcgtaagactcgacatccttcaagc
agacaggaatctttatcagtagacttgtctgaaaaatcatttgtggagacccaagcagac
atcttcaaccacaggcacggcttactaatattgcatctccttgctgctttgatgtttgtg
ccctctcttgccgcttggttccagaggattggaacgggacaaagtttcccatggtttgct
gactcggctctctgtgttggcgttatcttccacggagtactgaactcgagaccagagtca
agcatccttcgctctttcccatctctcttgggacacaaactcggtccccatcacatgtat
ttccttgccggctactgctgcttcttctctggactagacttggctccatacaaagtgttc
tacgccattgctgcgttaggctacatctccttgactcttaagatctcacaggtgaacaaa
aacgaccttcgtttccgtaccaaaagcaggatacacagaaactga
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